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Difference between revisions of "TSS:Mm 99617.1"

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Line 2: Line 2:
 
|GP3A=
 
|GP3A=
 
|INGRB3=
 
|INGRB3=
|all_trans=AK157958:17 AF026509:19 ENSMUST00000021028.4:-27 NM_016780:-27 BC125518:-27 BC125520:-27 LF204987:-28 LF198938:-28 MA440564:-28 MA434515:-28 AY541673:49 U83167:52 LF203088:-473 MA438665:-473
+
|all_trans=MGI:96612
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 24: Line 24:
 
|nearest_refseq=NM_016780
 
|nearest_refseq=NM_016780
 
|nearest_unigene=Mm.87150
 
|nearest_unigene=Mm.87150
|num_trans=14
+
|num_trans=16416
 
|species=mouse
 
|species=mouse
 
|start=104608026
 
|start=104608026

Latest revision as of 19:30, 28 July 2021

Basic information about the TSS


TSS ID:mm_99617.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:104608026
End:104608037
Strand:+
TSS Score:1
Start of the center position in the TSS region:104608031
End of the center position in the TSS region:104608032



Gene and protein annotation


Transcript_name:AK157958
Distance:17
GeneID:16416
HGNC/MGI_ID:MGI:96612
UniProt_ID:
Gene_name:integrin beta 3
Gene_symbol:Itgb3
Gene_synonyms:CD61 platelet_glycoprotein_IIIa__(GP3A)
Gene_source:MGI:96612



Transcript annotation


Transcript_name:AK157958
Distance:17
Num_trans:16416
All_trans:MGI:96612



TATA-Box annotation


Distance to TSS:32
Nearest PromoterID:NM_016780
Entrez ID:16416
Nearest Unigene:Mm.87150
Nearest Refseq:NM_016780
Nearest Ensembl:ENSMUSG00000020689
Gene Name:integrin beta 3
Gene Alias:CD61|GP3A|INGRB3
Gene Description:integrin beta 3
Gene Type:protein-coding
CpG%:0.12
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):