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Difference between revisions of "TSS:Hg 243070.1"

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Line 32: Line 32:
 
|start_of_center_position=114503358
 
|start_of_center_position=114503358
 
|strand=-
 
|strand=-
|transcript_name=NM_001083885
+
|transcript_name=NM_001083885.3
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_243070.1
 
|tss_id=hg_243070.1

Latest revision as of 15:01, 21 July 2021

Basic information about the TSS


TSS ID:hg_243070.1
Species:human
Chr:chr9
TSS Classification:no
Start:114503358
End:114503359
Strand:-
TSS Score:1
Start of the center position in the TSS region:114503358
End of the center position in the TSS region:114503359



Gene and protein annotation


Transcript_name:NM_001083885.3
Distance:144
GeneID:25861
HGNC/MGI_ID:HGNC:16361
UniProt_ID:Q9P202
Gene_name:whirlin
Gene_symbol:WHRN
Gene_synonyms:CIP98 PDZD7B USH2D
Gene_source:HGNC:16361



Transcript annotation


Transcript_name:NM_001083885.3
Distance:144
Num_trans:3
All_trans:NM_001083885:144 ENST00000265134.10:186 AL110228:186



TATA-Box annotation


Distance to TSS:55
Nearest PromoterID:NM_177924
Entrez ID:427
Nearest Unigene:Hs.527412
Nearest Refseq:NM_004315
Nearest Ensembl:ENSG00000104763
Gene Name:whirlin
Gene Alias:AC|ACDase|ASAH|PHP|PHP32|SMAPME
Gene Description:N-acylsphingosine amidohydrolase 1
Gene Type:protein-coding
CpG%:0.12
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):