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Difference between revisions of "TSS:Hg 243411.1"

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Line 4: Line 4:
 
|USH2D=
 
|USH2D=
 
|WI=
 
|WI=
|all_trans=ENST00000466120.1:-2 AK127702:-109 KJ905038:-190
+
|all_trans=HGNC:26724
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 26: Line 26:
 
|nearest_refseq=NM_015404
 
|nearest_refseq=NM_015404
 
|nearest_unigene=Hs.93836
 
|nearest_unigene=Hs.93836
|num_trans=3
+
|num_trans=203286
 
|species=human
 
|species=human
 
|start=98790493
 
|start=98790493

Latest revision as of 15:08, 21 July 2021

Basic information about the TSS


TSS ID:hg_243411.1
Species:human
Chr:chr9
TSS Classification:no
Start:98790493
End:98790494
Strand:-
TSS Score:1
Start of the center position in the TSS region:98790493
End of the center position in the TSS region:98790494



Gene and protein annotation


Transcript_name:ENST00000466120.1
Distance:-2
GeneID:203286
HGNC/MGI_ID:HGNC:26724
UniProt_ID:
Gene_name:ankyrin repeat and sterile alpha motif domain containing 6
Gene_symbol:ANKS6
Gene_synonyms:FLJ36928 NPHP16
Gene_source:HGNC:26724



Transcript annotation


Transcript_name:ENST00000466120.1
Distance:-2
Num_trans:203286
All_trans:HGNC:26724



TATA-Box annotation


Distance to TSS:-144
Nearest PromoterID:NM_001083885
Entrez ID:25861
Nearest Unigene:Hs.93836
Nearest Refseq:NM_015404
Nearest Ensembl:ENSG00000095397
Gene Name:ankyrin repeat and sterile alpha motif domain containing 6
Gene Alias:CIP98|DFNB31|PDZD7B|USH2D|WI
Gene Description:whirlin
Gene Type:protein-coding
CpG%:0.01
GC%:0.512438
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):