Difference between revisions of "TSS:Hg 101134.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=35 |entrez_id=257019 |gc_percent=0.522388 |gene_alias=4.1O|EPB41L4O|EPB41LO|P410 |gene_description=FERM domain containing 3 |ge...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |EPB41L4O= | ||
| + | |EPB41LO= | ||
| + | |P410= | ||
| + | |all_trans=NM_001244962:0 NM_001375487:0 ENST00000328788.5:-14 BC023560:-14 GQ129452:52 KJ906467:53 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=16 | ||
| + | |end=83267273 | ||
| + | |end_of_center_position=83267252 | ||
|entrez_id=257019 | |entrez_id=257019 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=4.1O | + | |gene_alias=4.1O{{!}}EPB41L4O{{!}}EPB41LO{{!}}P410 |
|gene_description=FERM domain containing 3 | |gene_description=FERM domain containing 3 | ||
| − | |gene_name=FRMD3 | + | |gene_id=257019 |
| + | |gene_name=FERM domain containing 3 | ||
| + | |gene_source=HGNC:24125 | ||
| + | |gene_symbol=FRMD3 | ||
| + | |gene_synonyms=EPB41L4O MGC20553 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24125 | ||
|nearest_ensembl=ENSG00000172159 | |nearest_ensembl=ENSG00000172159 | ||
|nearest_promoter_id=NM_001244962 | |nearest_promoter_id=NM_001244962 | ||
|nearest_refseq=NM_174938 | |nearest_refseq=NM_174938 | ||
|nearest_unigene=Hs.127535 | |nearest_unigene=Hs.127535 | ||
| − | |tata_box= | + | |num_trans=6 |
| + | |species=human | ||
| + | |start=83267230 | ||
| + | |start_of_center_position=83267251 | ||
| + | |strand=- | ||
| + | |tata_box=29(GTCCTTTAAAAC,-,0.00),31(CCTTTAAAACAG,+,0.00) | ||
| + | |transcript_name=NM_001244962.2 NM_001375487.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101134.1 | |tss_id=hg_101134.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A2A2Y4 | ||
}} | }} | ||
Latest revision as of 17:58, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 83267251 |
|---|---|
| End of the center position in the TSS region: | 83267252 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001244962.2 NM_001375487.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | NM_001244962:0 NM_001375487:0 ENST00000328788.5:-14 BC023560:-14 GQ129452:52 KJ906467:53 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_001244962 |
| Entrez ID: | 257019 |
| Nearest Unigene: | Hs.127535 |
| Nearest Refseq: | NM_174938 |
| Nearest Ensembl: | ENSG00000172159 |
| Gene Name: | FERM domain containing 3 |
| Gene Alias: | 4.1O|EPB41L4O|EPB41LO|P410 |
| Gene Description: | FERM domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 29(GTCCTTTAAAAC,-,0.00),31(CCTTTAAAACAG,+,0.00) |
