Difference between revisions of "TSS:Hg 231659.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000277541.6:0 uc004chz.4:0 NM_017617:33 AF308602:33 M73980:33 FR772924:-307 LG052812:-364 |chr=chr9 |cpg_percent=0.145 |distance=0 |distance_to_ts...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AOVD1= |
| + | |TAN1= | ||
| + | |all_trans=HGNC:7881 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=33 |
| − | |distance_to_tss= | + | |distance_to_tss=191 |
|end=136545895 | |end=136545895 | ||
| + | |end_of_center_position=136545857 | ||
|entrez_id=4851 | |entrez_id=4851 | ||
|gc_percent=0.820896 | |gc_percent=0.820896 | ||
| − | |gene_alias=AOS5 | + | |gene_alias=AOS5{{!}}AOVD1{{!}}TAN1{{!}}hN1 |
| − | |gene_description=notch 1 | + | |gene_description=notch receptor 1 |
|gene_id=4851 | |gene_id=4851 | ||
| − | |gene_name=notch 1 | + | |gene_name=notch receptor 1 |
|gene_source=HGNC:7881 | |gene_source=HGNC:7881 | ||
|gene_symbol=NOTCH1 | |gene_symbol=NOTCH1 | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hN1= | ||
|hgnc_mgi_id=HGNC:7881 | |hgnc_mgi_id=HGNC:7881 | ||
|nearest_ensembl=ENSG00000148400 | |nearest_ensembl=ENSG00000148400 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_017617 | |nearest_refseq=NM_017617 | ||
|nearest_unigene=Hs.495473 | |nearest_unigene=Hs.495473 | ||
| − | |num_trans= | + | |num_trans=4851 |
|species=human | |species=human | ||
|start=136545818 | |start=136545818 | ||
| + | |start_of_center_position=136545856 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AF308602 M73980 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_231659.1 | |tss_id=hg_231659.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 10:54, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136545856 |
|---|---|
| End of the center position in the TSS region: | 136545857 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF308602 M73980 |
|---|---|
| Distance: | 33 |
| Num_trans: | 4851 |
| All_trans: | HGNC:7881 |
TATA-Box annotation
| Distance to TSS: | 191 |
|---|---|
| Nearest PromoterID: | NM_017617 |
| Entrez ID: | 4851 |
| Nearest Unigene: | Hs.495473 |
| Nearest Refseq: | NM_017617 |
| Nearest Ensembl: | ENSG00000148400 |
| Gene Name: | notch receptor 1 |
| Gene Alias: | AOS5|AOVD1|TAN1|hN1 |
| Gene Description: | notch receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.820896 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
