Difference between revisions of "TSS:Hg 232139.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000398250.5:27 NM_001318166:27 NM_001318167:27 NM_001318168:27 NM_001318169:27 NM_001030059:27 NR_134516:27 uc001lev.1:27 BC101267:144 BC101269:14...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |PPAPDC1= |
| + | |PPAPDC1A= | ||
| + | |all_trans=HGNC:3689 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance= | + | |distance=-16 |
|distance_to_tss=-27 | |distance_to_tss=-27 | ||
| − | |end= | + | |end=121594242 |
| + | |end_of_center_position=121594242 | ||
|entrez_id=196051 | |entrez_id=196051 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=DPPL2 | + | |gene_alias=DPPL2{{!}}PPAPDC1{{!}}PPAPDC1A |
|gene_description=phospholipid phosphatase 4 | |gene_description=phospholipid phosphatase 4 | ||
| − | |gene_id= | + | |gene_id=2263 |
| − | |gene_name= | + | |gene_name=fibroblast growth factor receptor 2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:3689 |
| − | |gene_symbol= | + | |gene_symbol=FGFR2 |
| − | |gene_synonyms= | + | |gene_synonyms=CD332 CEK3 ECT1 K-SAM TK14 TK25 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:3689 |
|nearest_ensembl=ENSG00000203805 | |nearest_ensembl=ENSG00000203805 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001318166 |
|nearest_refseq=NM_001030059 | |nearest_refseq=NM_001030059 | ||
|nearest_unigene=Hs.40479 | |nearest_unigene=Hs.40479 | ||
| − | |num_trans= | + | |num_trans=2263 |
|species=human | |species=human | ||
| − | |start= | + | |start=121594241 |
| − | |strand= | + | |start_of_center_position=121594241 |
| − | |transcript_name= | + | |strand=- |
| − | |tss_classification= | + | |transcript_name=AK308621 |
| + | |tss_classification=no | ||
|tss_id=hg_232139.1 | |tss_id=hg_232139.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P21802 |
}} | }} | ||
Latest revision as of 11:04, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121594241 |
|---|---|
| End of the center position in the TSS region: | 121594242 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK308621 |
|---|---|
| Distance: | -16 |
| Num_trans: | 2263 |
| All_trans: | HGNC:3689 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_001318166 |
| Entrez ID: | 196051 |
| Nearest Unigene: | Hs.40479 |
| Nearest Refseq: | NM_001030059 |
| Nearest Ensembl: | ENSG00000203805 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | DPPL2|PPAPDC1|PPAPDC1A |
| Gene Description: | phospholipid phosphatase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
