Difference between revisions of "TSS:Hg 232200.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=CR407690:-169 KU178388:-169 KU178389:-169 CU674070:-170 KJ892377:-170 AB590763:-172 AK290643:-194 X56134:-212 Z19554:-288 BC030573:-293 BC000163:-293 AF...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:12692 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance= | + | |distance=207 |
|distance_to_tss=391 | |distance_to_tss=391 | ||
| − | |end= | + | |end=17236379 |
| + | |end_of_center_position=17236374 | ||
|entrez_id=100507347 | |entrez_id=100507347 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_108060 | |nearest_refseq=NR_108060 | ||
|nearest_unigene=Hs.740502 | |nearest_unigene=Hs.740502 | ||
| − | |num_trans= | + | |num_trans=7431 |
|species=human | |species=human | ||
| − | |start= | + | |start=17236367 |
| + | |start_of_center_position=17236373 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC031031 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_232200.1 | |tss_id=hg_232200.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 11:05, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17236373 |
|---|---|
| End of the center position in the TSS region: | 17236374 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC031031 |
|---|---|
| Distance: | 207 |
| Num_trans: | 7431 |
| All_trans: | HGNC:12692 |
TATA-Box annotation
| Distance to TSS: | 391 |
|---|---|
| Nearest PromoterID: | NR_108061 |
| Entrez ID: | 100507347 |
| Nearest Unigene: | Hs.740502 |
| Nearest Refseq: | NR_108060 |
| Nearest Ensembl: | ENSG00000229124 |
| Gene Name: | vimentin |
| Gene Alias: | - |
| Gene Description: | VIM antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.125 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
