Difference between revisions of "TSS:Hg 232228.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK123004:-432 ENST00000375946.8:466 NM_001172304:466 NM_001172303:466 NM_032844:466 uc001itl.3:466 |chr=chr10 |cpg_percent=0.07 |distance=-432 |distance...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |MEG4= |
| + | |PAMP= | ||
| + | |YME1L= | ||
| + | |all_trans=HGNC:17327 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance=- | + | |distance=-2 |
| − | |distance_to_tss= | + | |distance_to_tss=28 |
| − | |end= | + | |end=28532495 |
| + | |end_of_center_position=28532495 | ||
|entrez_id=10730 | |entrez_id=10730 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=FTSH | + | |gene_alias=FTSH{{!}}MEG4{{!}}OPA11{{!}}PAMP{{!}}YME1L |
|gene_description=YME1 like 1 ATPase | |gene_description=YME1 like 1 ATPase | ||
| − | |gene_id= | + | |gene_id=51322 |
| − | |gene_name= | + | |gene_name=WW domain containing adaptor with coiled-coil |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:17327 |
| − | |gene_symbol= | + | |gene_symbol=WAC |
| − | |gene_synonyms= | + | |gene_synonyms=BM-016 FLJ31290 MGC10753 PRO1741 Wwp4 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:17327 |
|nearest_ensembl=ENSG00000136758 | |nearest_ensembl=ENSG00000136758 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_014263 |
|nearest_refseq=NM_014263 | |nearest_refseq=NM_014263 | ||
|nearest_unigene=Hs.74647 | |nearest_unigene=Hs.74647 | ||
| − | |num_trans= | + | |num_trans=51322 |
|species=human | |species=human | ||
| − | |start= | + | |start=28532494 |
| + | |start_of_center_position=28532494 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000428935.6 ENST00000680735.1 ENST00000375664.8 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232228.1 | |tss_id=hg_232228.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9BTA9 Q9P1G8 |
}} | }} | ||
Latest revision as of 11:06, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 28532494 |
|---|---|
| End of the center position in the TSS region: | 28532495 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000428935.6 ENST00000680735.1 ENST00000375664.8 |
|---|---|
| Distance: | -2 |
| Num_trans: | 51322 |
| All_trans: | HGNC:17327 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_014263 |
| Entrez ID: | 10730 |
| Nearest Unigene: | Hs.74647 |
| Nearest Refseq: | NM_014263 |
| Nearest Ensembl: | ENSG00000136758 |
| Gene Name: | WW domain containing adaptor with coiled-coil |
| Gene Alias: | FTSH|MEG4|OPA11|PAMP|YME1L |
| Gene Description: | YME1 like 1 ATPase |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
