Difference between revisions of "TSS:Hg 232332.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:8874 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=3 |
|distance_to_tss=-66408 | |distance_to_tss=-66408 | ||
| − | |end= | + | |end=6146313 |
| + | |end_of_center_position=6146313 | ||
|entrez_id=283025 | |entrez_id=283025 | ||
|gc_percent=0.343284 | |gc_percent=0.343284 | ||
|gene_alias=C10orf40 | |gene_alias=C10orf40 | ||
|gene_description=long intergenic non-protein coding RNA 1553 | |gene_description=long intergenic non-protein coding RNA 1553 | ||
| − | |gene_name= | + | |gene_id=5209 |
| + | |gene_name=6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 | ||
| + | |gene_source=HGNC:8874 | ||
| + | |gene_symbol=PFKFB3 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:8874 | ||
|nearest_ensembl=ENSG00000235931 | |nearest_ensembl=ENSG00000235931 | ||
|nearest_promoter_id=NR_024340 | |nearest_promoter_id=NR_024340 | ||
|nearest_refseq=NM_001017982 | |nearest_refseq=NM_001017982 | ||
|nearest_unigene=Hs.522955 | |nearest_unigene=Hs.522955 | ||
| − | |num_trans= | + | |num_trans=5209 |
|species=human | |species=human | ||
| − | |start= | + | |start=6146312 |
| − | |strand= | + | |start_of_center_position=6146312 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=ENST00000536985.6 AK304450 |
| + | |tss_classification=yes | ||
|tss_id=hg_232332.1 | |tss_id=hg_232332.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q16875 | ||
}} | }} | ||
Latest revision as of 11:08, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6146312 |
|---|---|
| End of the center position in the TSS region: | 6146313 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000536985.6 AK304450 |
|---|---|
| Distance: | 3 |
| Num_trans: | 5209 |
| All_trans: | HGNC:8874 |
TATA-Box annotation
| Distance to TSS: | -66408 |
|---|---|
| Nearest PromoterID: | NR_024340 |
| Entrez ID: | 283025 |
| Nearest Unigene: | Hs.522955 |
| Nearest Refseq: | NM_001017982 |
| Nearest Ensembl: | ENSG00000235931 |
| Gene Name: | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 |
| Gene Alias: | C10orf40 |
| Gene Description: | long intergenic non-protein coding RNA 1553 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.343284 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
