Difference between revisions of "TSS:Hg 232397.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000372499.5:-52 NM_032024:-52 uc001jxi.4:-52 AF267860:-52 |chr=chr10 |cpg_percent=0.035 |distance=-52 |distance_to_tss=52 |end=75782813 |entrez_id...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:10411 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=52 | |distance_to_tss=52 | ||
| − | |end= | + | |end=78033838 |
| + | |end_of_center_position=78033837 | ||
|entrez_id=83938 | |entrez_id=83938 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=CDA017 | + | |gene_alias=C10orf11{{!}}CDA017 |
| − | |gene_description= | + | |gene_description=leucine rich melanocyte differentiation associated |
| − | |gene_id= | + | |gene_id=6229 |
| − | |gene_name= | + | |gene_name=ribosomal protein S24 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:10411 |
| − | |gene_symbol= | + | |gene_symbol=RPS24 |
| − | |gene_synonyms= | + | |gene_synonyms=S24 eS24 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:10411 |
|nearest_ensembl=ENSG00000148655 | |nearest_ensembl=ENSG00000148655 | ||
|nearest_promoter_id=NM_032024 | |nearest_promoter_id=NM_032024 | ||
|nearest_refseq=NM_032024 | |nearest_refseq=NM_032024 | ||
|nearest_unigene=Hs.118161 | |nearest_unigene=Hs.118161 | ||
| − | |num_trans= | + | |num_trans=6229 |
|species=human | |species=human | ||
| − | |start= | + | |start=78033835 |
| + | |start_of_center_position=78033836 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000645440.1 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232397.1 | |tss_id=hg_232397.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A2R8Y849 |
}} | }} | ||
Latest revision as of 11:09, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 78033836 |
|---|---|
| End of the center position in the TSS region: | 78033837 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000645440.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6229 |
| All_trans: | HGNC:10411 |
TATA-Box annotation
| Distance to TSS: | 52 |
|---|---|
| Nearest PromoterID: | NM_032024 |
| Entrez ID: | 83938 |
| Nearest Unigene: | Hs.118161 |
| Nearest Refseq: | NM_032024 |
| Nearest Ensembl: | ENSG00000148655 |
| Gene Name: | ribosomal protein S24 |
| Gene Alias: | C10orf11|CDA017 |
| Gene Description: | leucine rich melanocyte differentiation associated |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
