Difference between revisions of "TSS:Hg 232780.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |chr= | + | |all_trans=HGNC:24847 |
| + | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=46 |
|distance_to_tss=216039 | |distance_to_tss=216039 | ||
| − | |end= | + | |end=11654329 |
| + | |end_of_center_position=11654329 | ||
|entrez_id=387755 | |entrez_id=387755 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=INSC spindle orientation adaptor protein |
| − | |gene_name= | + | |gene_id=93611 |
| + | |gene_name=F-box protein 44 | ||
| + | |gene_source=HGNC:24847 | ||
| + | |gene_symbol=FBXO44 | ||
| + | |gene_synonyms=FBG3 FBX30 Fbx44 Fbxo6a MGC14140 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24847 | ||
|nearest_ensembl=ENSG00000188487 | |nearest_ensembl=ENSG00000188487 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001278314 |
|nearest_refseq=NM_001031853 | |nearest_refseq=NM_001031853 | ||
|nearest_unigene=Hs.591997 | |nearest_unigene=Hs.591997 | ||
| − | |num_trans= | + | |num_trans=93611 |
|species=human | |species=human | ||
| − | |start= | + | |start=11654328 |
| − | |strand= | + | |start_of_center_position=11654328 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=ENST00000251546.8 AK055344 |
| + | |tss_classification=yes | ||
|tss_id=hg_232780.1 | |tss_id=hg_232780.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A024R4J6 | ||
}} | }} | ||
Latest revision as of 11:18, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 11654328 |
|---|---|
| End of the center position in the TSS region: | 11654329 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000251546.8 AK055344 |
|---|---|
| Distance: | 46 |
| Num_trans: | 93611 |
| All_trans: | HGNC:24847 |
TATA-Box annotation
| Distance to TSS: | 216039 |
|---|---|
| Nearest PromoterID: | NM_001278314 |
| Entrez ID: | 387755 |
| Nearest Unigene: | Hs.591997 |
| Nearest Refseq: | NM_001031853 |
| Nearest Ensembl: | ENSG00000188487 |
| Gene Name: | F-box protein 44 |
| Gene Alias: | - |
| Gene Description: | INSC spindle orientation adaptor protein |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
