Difference between revisions of "TSS:Hg 233298.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ADAMTS-4= | ||
| + | |ADMP-1= | ||
|all_trans=ENST00000367993.7:286 NM_004550:286 uc001fyv.4:286 BC008868:286 | |all_trans=ENST00000367993.7:286 NM_004550:286 uc001fyv.4:286 BC008868:286 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=27 |
| − | |end= | + | |end=161612722 |
| + | |end_of_center_position=161612716 | ||
|entrez_id=9507 | |entrez_id=9507 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=ADAMTS-2 | + | |gene_alias=ADAMTS-2{{!}}ADAMTS-4{{!}}ADMP-1 |
|gene_description=ADAM metallopeptidase with thrombospondin type 1 motif 4 | |gene_description=ADAM metallopeptidase with thrombospondin type 1 motif 4 | ||
|gene_id=4720 | |gene_id=4720 | ||
| − | |gene_name= | + | |gene_name=ADAMTS4 |
|gene_source=HGNC:7708 | |gene_source=HGNC:7708 | ||
|gene_symbol=NDUFS2 | |gene_symbol=NDUFS2 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:7708 | |hgnc_mgi_id=HGNC:7708 | ||
|nearest_ensembl=ENSG00000158859 | |nearest_ensembl=ENSG00000158859 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001320336 |
|nearest_refseq=NM_005099 | |nearest_refseq=NM_005099 | ||
|nearest_unigene=Hs.211604 | |nearest_unigene=Hs.211604 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=161612709 |
| + | |start_of_center_position=161612715 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233298.1 | |tss_id=hg_233298.1 | ||
Latest revision as of 08:57, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 161612715 |
|---|---|
| End of the center position in the TSS region: | 161612716 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000367993.7:286 NM_004550:286 uc001fyv.4:286 BC008868:286 |
TATA-Box annotation
| Distance to TSS: | 27 |
|---|---|
| Nearest PromoterID: | NM_001320336 |
| Entrez ID: | 9507 |
| Nearest Unigene: | Hs.211604 |
| Nearest Refseq: | NM_005099 |
| Nearest Ensembl: | ENSG00000158859 |
| Gene Name: | ADAMTS4 |
| Gene Alias: | ADAMTS-2|ADAMTS-4|ADMP-1 |
| Gene Description: | ADAM metallopeptidase with thrombospondin type 1 motif 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
