Difference between revisions of "TSS:Hg 101184.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |TRKB= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=356755 | ||
| + | |end=85062668 | ||
| + | |end_of_center_position=85062656 | ||
|entrez_id=4915 | |entrez_id=4915 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=GP145-TrkB | + | |gene_alias=EIEE58{{!}}GP145-TrkB{{!}}OBHD{{!}}TRKB{{!}}trk-B |
|gene_description=neurotrophic receptor tyrosine kinase 2 | |gene_description=neurotrophic receptor tyrosine kinase 2 | ||
|gene_name=NTRK2 | |gene_name=NTRK2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148053 | |nearest_ensembl=ENSG00000148053 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369552 |
|nearest_refseq=NM_006180 | |nearest_refseq=NM_006180 | ||
|nearest_unigene=Hs.494312 | |nearest_unigene=Hs.494312 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=85062643 | ||
| + | |start_of_center_position=85062655 | ||
| + | |strand=- | ||
| + | |tata_box=-40(CTTTTAATACCC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |trk-B= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101184.1 | |tss_id=hg_101184.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:34, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 85062655 |
|---|---|
| End of the center position in the TSS region: | 85062656 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 356755 |
|---|---|
| Nearest PromoterID: | NM_001369552 |
| Entrez ID: | 4915 |
| Nearest Unigene: | Hs.494312 |
| Nearest Refseq: | NM_006180 |
| Nearest Ensembl: | ENSG00000148053 |
| Gene Name: | NTRK2 |
| Gene Alias: | EIEE58|GP145-TrkB|OBHD|TRKB|trk-B |
| Gene Description: | neurotrophic receptor tyrosine kinase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -40(CTTTTAATACCC,+,0.00) |
