Difference between revisions of "TSS:Hg 236872.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |CARPX= |
| + | |HUCEP-15= | ||
| + | |all_trans=HGNC:16848 | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance= | + | |distance=8 |
| − | |distance_to_tss= | + | |distance_to_tss=339 |
| − | |end= | + | |end=74592239 |
| + | |end_of_center_position=74592239 | ||
|entrez_id=56934 | |entrez_id=56934 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=CA-RPX | + | |gene_alias=CA-RPX{{!}}CARPX{{!}}HUCEP-15 |
|gene_description=carbonic anhydrase 10 | |gene_description=carbonic anhydrase 10 | ||
| − | |gene_id= | + | |gene_id=100131439 |
| − | |gene_name= | + | |gene_name=CD300 molecule like family member d |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:16848 |
| − | |gene_symbol= | + | |gene_symbol=CD300LD |
| − | |gene_synonyms= | + | |gene_synonyms=CD300D CMRF35A4 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:16848 |
|nearest_ensembl=ENSG00000154975 | |nearest_ensembl=ENSG00000154975 | ||
|nearest_promoter_id=NM_020178 | |nearest_promoter_id=NM_020178 | ||
|nearest_refseq=NM_020178 | |nearest_refseq=NM_020178 | ||
|nearest_unigene=Hs.463466 | |nearest_unigene=Hs.463466 | ||
| − | |num_trans= | + | |num_trans=100131439 |
|species=human | |species=human | ||
| − | |start= | + | |start=74592238 |
| + | |start_of_center_position=74592238 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=EF137868 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_236872.1 | |tss_id=hg_236872.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 12:47, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74592238 |
|---|---|
| End of the center position in the TSS region: | 74592239 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | EF137868 |
|---|---|
| Distance: | 8 |
| Num_trans: | 100131439 |
| All_trans: | HGNC:16848 |
TATA-Box annotation
| Distance to TSS: | 339 |
|---|---|
| Nearest PromoterID: | NM_020178 |
| Entrez ID: | 56934 |
| Nearest Unigene: | Hs.463466 |
| Nearest Refseq: | NM_020178 |
| Nearest Ensembl: | ENSG00000154975 |
| Gene Name: | CD300 molecule like family member d |
| Gene Alias: | CA-RPX|CARPX|HUCEP-15 |
| Gene Description: | carbonic anhydrase 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
