Difference between revisions of "TSS:Hg 237537.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK303700:-81 |chr=chr1 |cpg_percent=0.015 |distance=-81 |distance_to_tss=636 |end=92876514 |entrez_id=388650 |gc_percent=0.393035 |gene_alias=- |gene_de...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=AK303700:-81 | |all_trans=AK303700:-81 | ||
| − | |chr= | + | |chr=chr19 |
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=636 | |distance_to_tss=636 | ||
| − | |end= | + | |end=41687018 |
| + | |end_of_center_position=41687010 | ||
|entrez_id=388650 | |entrez_id=388650 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias= | + | |gene_alias=FAM69A |
| − | |gene_description= | + | |gene_description=divergent protein kinase domain 1A |
|gene_id=388650 | |gene_id=388650 | ||
| − | |gene_name= | + | |gene_name=DIPK1A |
|gene_source=HGNC:32213 | |gene_source=HGNC:32213 | ||
|gene_symbol=FAM69A | |gene_symbol=FAM69A | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001006605 | |nearest_refseq=NM_001006605 | ||
|nearest_unigene=Hs.180946 | |nearest_unigene=Hs.180946 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=41687001 |
| − | |strand= | + | |start_of_center_position=41687009 |
| − | |tata_box= | + | |strand=+ |
| − | |transcript_name= | + | |tata_box=-37(CCATATAAAAGC,-,0.00) |
| + | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_237537.1 | |tss_id=hg_237537.1 | ||
Latest revision as of 10:35, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 41687009 |
|---|---|
| End of the center position in the TSS region: | 41687010 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | AK303700:-81 |
TATA-Box annotation
| Distance to TSS: | 636 |
|---|---|
| Nearest PromoterID: | NM_001252271 |
| Entrez ID: | 388650 |
| Nearest Unigene: | Hs.180946 |
| Nearest Refseq: | NM_001006605 |
| Nearest Ensembl: | ENSG00000154511 |
| Gene Name: | DIPK1A |
| Gene Alias: | FAM69A |
| Gene Description: | divergent protein kinase domain 1A |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -37(CCATATAAAAGC,-,0.00) |
