Difference between revisions of "TSS:Hg 237876.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AB384482:31 BC148348:31 BC042963:62 NM_014839:74 AK056665:-74 AY304518:-74 AK291369:74 AK297417:77 AF357013:101 AB007924:-122 ENST00000457765.6:-126 NM_001166252:-126 AF541281:-126 AK300361:130 ENST00000370185.8:-465 |
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=31 |
|distance_to_tss=59 | |distance_to_tss=59 | ||
| − | |end= | + | |end=99264418 |
| + | |end_of_center_position=99264418 | ||
|entrez_id=100049587 | |entrez_id=100049587 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| Line 11: | Line 12: | ||
|gene_description=sialic acid binding Ig like lectin 14 | |gene_description=sialic acid binding Ig like lectin 14 | ||
|gene_id=100049587 | |gene_id=100049587 | ||
| − | |gene_name= | + | |gene_name=SIGLEC14 |
|gene_source=HGNC:32926 | |gene_source=HGNC:32926 | ||
|gene_symbol=SIGLEC14 | |gene_symbol=SIGLEC14 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001098612 | |nearest_refseq=NM_001098612 | ||
|nearest_unigene=Hs.707374 | |nearest_unigene=Hs.707374 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
| − | |start= | + | |start=99264417 |
| − | |strand= | + | |start_of_center_position=99264417 |
| − | |transcript_name= | + | |strand=+ |
| + | |transcript_name=AB384482 BC148348 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_237876.1 | |tss_id=hg_237876.1 | ||
Latest revision as of 10:43, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 99264417 |
|---|---|
| End of the center position in the TSS region: | 99264418 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB384482 BC148348 |
|---|---|
| Distance: | 31 |
| Num_trans: | 15 |
| All_trans: | AB384482:31 BC148348:31 BC042963:62 NM_014839:74 AK056665:-74 AY304518:-74 AK291369:74 AK297417:77 AF357013:101 AB007924:-122 ENST00000457765.6:-126 NM_001166252:-126 AF541281:-126 AK300361:130 ENST00000370185.8:-465 |
TATA-Box annotation
| Distance to TSS: | 59 |
|---|---|
| Nearest PromoterID: | NM_001098612 |
| Entrez ID: | 100049587 |
| Nearest Unigene: | Hs.707374 |
| Nearest Refseq: | NM_001098612 |
| Nearest Ensembl: | ENSG00000254415 |
| Gene Name: | SIGLEC14 |
| Gene Alias: | - |
| Gene Description: | sialic acid binding Ig like lectin 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
