Difference between revisions of "TSS:Hg 238734.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NR_003286:25 |chr=chr21 |cpg_percent=0.145 |distance=25 |distance_to_tss=-25 |end=8209606 |entrez_id=100008588 |gc_percent=0.691542 |gene_alias=RN18S1 |...") |
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| Line 3: | Line 3: | ||
|chr=chr21 | |chr=chr21 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-25 | |distance_to_tss=-25 | ||
| − | |end= | + | |end=8255218 |
| + | |end_of_center_position=8255215 | ||
|entrez_id=100008588 | |entrez_id=100008588 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=RN18S1 | + | |gene_alias=RN18S1{{!}}RNA18S5 |
| − | |gene_description= | + | |gene_description=RNA, 18S ribosomal N5 |
|gene_id=100008588 | |gene_id=100008588 | ||
| − | |gene_name= | + | |gene_name=RNA18SN5 |
|gene_source=HGNC:37657 | |gene_source=HGNC:37657 | ||
|gene_symbol=RNA18S5 | |gene_symbol=RNA18S5 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_003286 | |nearest_refseq=NR_003286 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=8255210 |
| + | |start_of_center_position=8255214 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_238734.1 | |tss_id=hg_238734.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:03, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 8255214 |
|---|---|
| End of the center position in the TSS region: | 8255215 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | NR_003286:25 |
TATA-Box annotation
| Distance to TSS: | -25 |
|---|---|
| Nearest PromoterID: | NR_003286 |
| Entrez ID: | 100008588 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_003286 |
| Nearest Ensembl: | |
| Gene Name: | RNA18SN5 |
| Gene Alias: | RN18S1|RNA18S5 |
| Gene Description: | RNA, 18S ribosomal N5 |
| Gene Type: | rRNA |
| CpG%: | 0.145 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
