Difference between revisions of "TSS:Hg 240168.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AY358772:-24 |chr=chr3 |cpg_percent=0.12 |distance=-24 |distance_to_tss=-156 |end=111859575 |entrez_id=90102 |gc_percent=0.761194 |gene_alias=LL5b|LL5be...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |LL5beta= | ||
|all_trans=AY358772:-24 | |all_trans=AY358772:-24 | ||
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-262 |
| − | |end= | + | |end=185919477 |
| + | |end_of_center_position=185919472 | ||
|entrez_id=90102 | |entrez_id=90102 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=LL5b | + | |gene_alias=LL5b{{!}}LL5beta |
|gene_description=pleckstrin homology like domain family B member 2 | |gene_description=pleckstrin homology like domain family B member 2 | ||
|gene_id=100128035 | |gene_id=100128035 | ||
| − | |gene_name= | + | |gene_name=PHLDB2 |
|gene_source=EntrezGene:100128035 | |gene_source=EntrezGene:100128035 | ||
|gene_symbol=LOC100128035 | |gene_symbol=LOC100128035 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_145753 | |nearest_refseq=NM_145753 | ||
|nearest_unigene=Hs.603252 | |nearest_unigene=Hs.603252 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=185919466 |
| + | |start_of_center_position=185919471 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_240168.1 | |tss_id=hg_240168.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q6UWI7 | |uniprot_id=Q6UWI7 | ||
}} | }} | ||
Latest revision as of 11:36, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 185919471 |
|---|---|
| End of the center position in the TSS region: | 185919472 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | AY358772:-24 |
TATA-Box annotation
| Distance to TSS: | -262 |
|---|---|
| Nearest PromoterID: | NM_001134439 |
| Entrez ID: | 90102 |
| Nearest Unigene: | Hs.603252 |
| Nearest Refseq: | NM_145753 |
| Nearest Ensembl: | ENSG00000144824 |
| Gene Name: | PHLDB2 |
| Gene Alias: | LL5b|LL5beta |
| Gene Description: | pleckstrin homology like domain family B member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
