Difference between revisions of "TSS:Hg 10123.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:9965 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=1 | ||
|distance_to_tss=-404 | |distance_to_tss=-404 | ||
| + | |end=8424247 | ||
| + | |end_of_center_position=8424241 | ||
|entrez_id=102724552 | |entrez_id=102724552 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=RERE antisense RNA 1 |
| − | |gene_name= | + | |gene_id=473 |
| + | |gene_name=arginine-glutamic acid dipeptide repeats | ||
| + | |gene_source=HGNC:9965 | ||
| + | |gene_symbol=RERE | ||
| + | |gene_synonyms=ARG ARP ATN2 DNB1 KIAA0458 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:9965 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_125999 | |nearest_promoter_id=NR_125999 | ||
|nearest_refseq=NR_125999 | |nearest_refseq=NR_125999 | ||
|nearest_unigene=Hs.568612 | |nearest_unigene=Hs.568612 | ||
| + | |num_trans=473 | ||
| + | |species=human | ||
| + | |start=8424234 | ||
| + | |start_of_center_position=8424240 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000465125.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10123.1 | |tss_id=hg_10123.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:00, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 8424240 |
|---|---|
| End of the center position in the TSS region: | 8424241 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000465125.1 |
|---|---|
| Distance: | 1 |
| Num_trans: | 473 |
| All_trans: | HGNC:9965 |
TATA-Box annotation
| Distance to TSS: | -404 |
|---|---|
| Nearest PromoterID: | NR_125999 |
| Entrez ID: | 102724552 |
| Nearest Unigene: | Hs.568612 |
| Nearest Refseq: | NR_125999 |
| Nearest Ensembl: | |
| Gene Name: | arginine-glutamic acid dipeptide repeats |
| Gene Alias: | - |
| Gene Description: | RERE antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
