Difference between revisions of "TSS:Hg 101234.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=NA | ||
|distance_to_tss=128692 | |distance_to_tss=128692 | ||
| + | |end=87277341 | ||
| + | |end_of_center_position=87277336 | ||
|entrez_id=401535 | |entrez_id=401535 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| Line 7: | Line 11: | ||
|gene_description=chromosome 9 open reading frame 170 | |gene_description=chromosome 9 open reading frame 170 | ||
|gene_name=C9orf170 | |gene_name=C9orf170 | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_161226 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_161226 |
|nearest_unigene=Hs.657740 | |nearest_unigene=Hs.657740 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=87277330 | ||
| + | |start_of_center_position=87277335 | ||
| + | |strand=- | ||
| + | |tata_box=-93(CCTTAAATGAGC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101234.1 | |tss_id=hg_101234.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 87277335 |
|---|---|
| End of the center position in the TSS region: | 87277336 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 128692 |
|---|---|
| Nearest PromoterID: | NR_161226 |
| Entrez ID: | 401535 |
| Nearest Unigene: | Hs.657740 |
| Nearest Refseq: | NR_161226 |
| Nearest Ensembl: | |
| Gene Name: | C9orf170 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 170 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -93(CCTTAAATGAGC,+,0.00) |
