Difference between revisions of "TSS:Hg 101240.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-110523 |entrez_id=1612 |gc_percent=0.452736 |gene_alias=DAPK |gene_description=death associated protein kinase 1 |gene_name=DAP...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=MG828763:-109 MG828762:-145 MG828764:-145 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-109 | ||
|distance_to_tss=-110523 | |distance_to_tss=-110523 | ||
| + | |end=87386709 | ||
| + | |end_of_center_position=87386705 | ||
|entrez_id=1612 | |entrez_id=1612 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=DAPK | + | |gene_alias=DAPK{{!}}ROCO3 |
|gene_description=death associated protein kinase 1 | |gene_description=death associated protein kinase 1 | ||
|gene_name=DAPK1 | |gene_name=DAPK1 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_004938 | |nearest_refseq=NM_004938 | ||
|nearest_unigene=Hs.380277 | |nearest_unigene=Hs.380277 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=87386700 | ||
| + | |start_of_center_position=87386704 | ||
| + | |strand=- | ||
| + | |transcript_name=MG828763 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101240.1 | |tss_id=hg_101240.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 87386704 |
|---|---|
| End of the center position in the TSS region: | 87386705 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | MG828763 |
|---|---|
| Distance: | -109 |
| Num_trans: | 3 |
| All_trans: | MG828763:-109 MG828762:-145 MG828764:-145 |
TATA-Box annotation
| Distance to TSS: | -110523 |
|---|---|
| Nearest PromoterID: | NM_001288731 |
| Entrez ID: | 1612 |
| Nearest Unigene: | Hs.380277 |
| Nearest Refseq: | NM_004938 |
| Nearest Ensembl: | ENSG00000196730 |
| Gene Name: | DAPK1 |
| Gene Alias: | DAPK|ROCO3 |
| Gene Description: | death associated protein kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
