Difference between revisions of "TSS:Hg 242714.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |chr= | + | |all_trans=HGNC:10368 |
| + | |chr=chr8 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-5 |
| − | |distance_to_tss= | + | |distance_to_tss=2880 |
| − | |end= | + | |end=144791911 |
| + | |end_of_center_position=144791910 | ||
|entrez_id=3364 | |entrez_id=3364 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
|gene_alias=hHUS1 | |gene_alias=hHUS1 | ||
|gene_description=HUS1 checkpoint clamp component | |gene_description=HUS1 checkpoint clamp component | ||
| − | |gene_name= | + | |gene_id=6132 |
| + | |gene_name=ribosomal protein L8 | ||
| + | |gene_source=HGNC:10368 | ||
| + | |gene_symbol=RPL8 | ||
| + | |gene_synonyms=L8 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10368 | ||
|nearest_ensembl=ENSG00000136273 | |nearest_ensembl=ENSG00000136273 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_037917 |
|nearest_refseq=NM_004507 | |nearest_refseq=NM_004507 | ||
|nearest_unigene=Hs.152983 | |nearest_unigene=Hs.152983 | ||
| − | |num_trans= | + | |num_trans=6132 |
|species=human | |species=human | ||
| − | |start= | + | |start=144791907 |
| − | |strand= | + | |start_of_center_position=144791909 |
| − | |transcript_name= | + | |strand=- |
| − | |tss_classification= | + | |transcript_name=BC000047 |
| + | |tss_classification=yes | ||
|tss_id=hg_242714.1 | |tss_id=hg_242714.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 14:53, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 144791909 |
|---|---|
| End of the center position in the TSS region: | 144791910 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC000047 |
|---|---|
| Distance: | -5 |
| Num_trans: | 6132 |
| All_trans: | HGNC:10368 |
TATA-Box annotation
| Distance to TSS: | 2880 |
|---|---|
| Nearest PromoterID: | NR_037917 |
| Entrez ID: | 3364 |
| Nearest Unigene: | Hs.152983 |
| Nearest Refseq: | NM_004507 |
| Nearest Ensembl: | ENSG00000136273 |
| Gene Name: | ribosomal protein L8 |
| Gene Alias: | hHUS1 |
| Gene Description: | HUS1 checkpoint clamp component |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
