Difference between revisions of "TSS:Hg 243046.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000534781.1:-490 uc064rpt.1:-490 | |all_trans=ENST00000534781.1:-490 uc064rpt.1:-490 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=1620 | |distance_to_tss=1620 | ||
| − | |end= | + | |end=111896839 |
| + | |end_of_center_position=111896837 | ||
|entrez_id=102465978 | |entrez_id=102465978 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 11: | Line 12: | ||
|gene_description=microRNA 6850 | |gene_description=microRNA 6850 | ||
|gene_id=6132 | |gene_id=6132 | ||
| − | |gene_name= | + | |gene_name=MIR6850 |
|gene_source=HGNC:10368 | |gene_source=HGNC:10368 | ||
|gene_symbol=RPL8 | |gene_symbol=RPL8 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:10368 | |hgnc_mgi_id=HGNC:10368 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000283764 |
|nearest_promoter_id=NR_106909 | |nearest_promoter_id=NR_106909 | ||
|nearest_refseq=NR_106909 | |nearest_refseq=NR_106909 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=111896834 |
| + | |start_of_center_position=111896836 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243046.1 | |tss_id=hg_243046.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 12:41, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111896836 |
|---|---|
| End of the center position in the TSS region: | 111896837 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000534781.1:-490 uc064rpt.1:-490 |
TATA-Box annotation
| Distance to TSS: | 1620 |
|---|---|
| Nearest PromoterID: | NR_106909 |
| Entrez ID: | 102465978 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106909 |
| Nearest Ensembl: | ENSG00000283764 |
| Gene Name: | MIR6850 |
| Gene Alias: | hsa-mir-6850 |
| Gene Description: | microRNA 6850 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
