Difference between revisions of "TSS:Hg 243130.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:16744 |
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-38 |
| − | |distance_to_tss= | + | |distance_to_tss=5106 |
| − | |end= | + | |end=128192066 |
| + | |end_of_center_position=128192066 | ||
|entrez_id=100507341 | |entrez_id=100507341 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=small integral membrane protein 18 | |gene_description=small integral membrane protein 18 | ||
| − | |gene_id= | + | |gene_id=25792 |
| − | |gene_name= | + | |gene_name=CDKN1A interacting zinc finger protein 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:16744 |
| − | |gene_symbol= | + | |gene_symbol=CIZ1 |
| − | |gene_synonyms= | + | |gene_synonyms=LSFR1 ZNF356 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:16744 |
|nearest_ensembl=ENSG00000253457 | |nearest_ensembl=ENSG00000253457 | ||
|nearest_promoter_id=NM_001206847 | |nearest_promoter_id=NM_001206847 | ||
|nearest_refseq=NM_001206847 | |nearest_refseq=NM_001206847 | ||
|nearest_unigene=Hs.659493 | |nearest_unigene=Hs.659493 | ||
| − | |num_trans= | + | |num_trans=25792 |
|species=human | |species=human | ||
| − | |start= | + | |start=128192065 |
| − | |strand= | + | |start_of_center_position=128192065 |
| − | |transcript_name= | + | |strand=- |
| − | |tss_classification= | + | |transcript_name=AK296363 |
| + | |tss_classification=yes | ||
|tss_id=hg_243130.1 | |tss_id=hg_243130.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B7Z3U7 Q9ULV3 |
}} | }} | ||
Latest revision as of 15:02, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 128192065 |
|---|---|
| End of the center position in the TSS region: | 128192066 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK296363 |
|---|---|
| Distance: | -38 |
| Num_trans: | 25792 |
| All_trans: | HGNC:16744 |
TATA-Box annotation
| Distance to TSS: | 5106 |
|---|---|
| Nearest PromoterID: | NM_001206847 |
| Entrez ID: | 100507341 |
| Nearest Unigene: | Hs.659493 |
| Nearest Refseq: | NM_001206847 |
| Nearest Ensembl: | ENSG00000253457 |
| Gene Name: | CDKN1A interacting zinc finger protein 1 |
| Gene Alias: | - |
| Gene Description: | small integral membrane protein 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
