Difference between revisions of "TSS:Hg 243185.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |DDVit-1= |
| − | |chr= | + | |EDAF-1= |
| + | |EDPF-1= | ||
| + | |EDPF1= | ||
| + | |MMS2= | ||
| + | |UEV-2= | ||
| + | |UEV2= | ||
| + | |all_trans=HGNC:4018 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance=- | + | |distance=-4 |
| − | |distance_to_tss= | + | |distance_to_tss=41434 |
| − | |end= | + | |end=137032836 |
| + | |end_of_center_position=137032836 | ||
|entrez_id=7336 | |entrez_id=7336 | ||
|gc_percent=0.283582 | |gc_percent=0.283582 | ||
| − | |gene_alias=DDVIT1 | + | |gene_alias=DDVIT1{{!}}DDVit-1{{!}}EDAF-1{{!}}EDPF-1{{!}}EDPF1{{!}}MMS2{{!}}UEV-2{{!}}UEV2 |
|gene_description=ubiquitin conjugating enzyme E2 V2 | |gene_description=ubiquitin conjugating enzyme E2 V2 | ||
| − | |gene_id= | + | |gene_id=2529 |
| − | |gene_name= | + | |gene_name=fucosyltransferase 7 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:4018 |
| − | |gene_symbol= | + | |gene_symbol=FUT7 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:4018 |
|nearest_ensembl=ENSG00000169139 | |nearest_ensembl=ENSG00000169139 | ||
|nearest_promoter_id=NM_003350 | |nearest_promoter_id=NM_003350 | ||
|nearest_refseq=NM_003350 | |nearest_refseq=NM_003350 | ||
|nearest_unigene=Hs.491695 | |nearest_unigene=Hs.491695 | ||
| − | |num_trans= | + | |num_trans=2529 |
|species=human | |species=human | ||
| − | |start= | + | |start=137032835 |
| − | |strand= | + | |start_of_center_position=137032835 |
| − | |transcript_name= | + | |strand=- |
| − | |tss_classification= | + | |transcript_name=BC086312 |
| + | |tss_classification=yes | ||
|tss_id=hg_243185.1 | |tss_id=hg_243185.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 15:03, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137032835 |
|---|---|
| End of the center position in the TSS region: | 137032836 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC086312 |
|---|---|
| Distance: | -4 |
| Num_trans: | 2529 |
| All_trans: | HGNC:4018 |
TATA-Box annotation
| Distance to TSS: | 41434 |
|---|---|
| Nearest PromoterID: | NM_003350 |
| Entrez ID: | 7336 |
| Nearest Unigene: | Hs.491695 |
| Nearest Refseq: | NM_003350 |
| Nearest Ensembl: | ENSG00000169139 |
| Gene Name: | fucosyltransferase 7 |
| Gene Alias: | DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 |
| Gene Description: | ubiquitin conjugating enzyme E2 V2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.283582 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
