Difference between revisions of "TSS:Hg 243236.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000519668.1:121 NM_001291339:121 uc003xxk.4:121 AJ583433:121 |chr=chr8 |cpg_percent=0 |distance=121 |distance_to_tss=-121 |end=67083727 |entrez_id...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |JBTS21= |
| − | |chr= | + | |all_trans=HGNC:640 |
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=8 |
|distance_to_tss=-121 | |distance_to_tss=-121 | ||
| − | |end= | + | |end=33402527 |
| + | |end_of_center_position=33402527 | ||
|entrez_id=79848 | |entrez_id=79848 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| − | |gene_alias=CSPP | + | |gene_alias=CSPP{{!}}JBTS21 |
|gene_description=centrosome and spindle pole associated protein 1 | |gene_description=centrosome and spindle pole associated protein 1 | ||
| − | |gene_id= | + | |gene_id=364 |
| − | |gene_name= | + | |gene_name=aquaporin 7 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:640 |
| − | |gene_symbol= | + | |gene_symbol=AQP7 |
| − | |gene_synonyms= | + | |gene_synonyms=AQP9 AQPap |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:640 |
|nearest_ensembl=ENSG00000104218 | |nearest_ensembl=ENSG00000104218 | ||
|nearest_promoter_id=NM_001291339 | |nearest_promoter_id=NM_001291339 | ||
|nearest_refseq=NM_024790 | |nearest_refseq=NM_024790 | ||
|nearest_unigene=Hs.370147 | |nearest_unigene=Hs.370147 | ||
| − | |num_trans= | + | |num_trans=364 |
|species=human | |species=human | ||
| − | |start= | + | |start=33402526 |
| − | |strand= | + | |start_of_center_position=33402526 |
| − | |transcript_name= | + | |strand=- |
| − | |tss_classification= | + | |transcript_name=AB006190 |
| + | |tss_classification=yes | ||
|tss_id=hg_243236.1 | |tss_id=hg_243236.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 15:04, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33402526 |
|---|---|
| End of the center position in the TSS region: | 33402527 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB006190 |
|---|---|
| Distance: | 8 |
| Num_trans: | 364 |
| All_trans: | HGNC:640 |
TATA-Box annotation
| Distance to TSS: | -121 |
|---|---|
| Nearest PromoterID: | NM_001291339 |
| Entrez ID: | 79848 |
| Nearest Unigene: | Hs.370147 |
| Nearest Refseq: | NM_024790 |
| Nearest Ensembl: | ENSG00000104218 |
| Gene Name: | aquaporin 7 |
| Gene Alias: | CSPP|JBTS21 |
| Gene Description: | centrosome and spindle pole associated protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
