Difference between revisions of "TSS:Hg 243313.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_004225:-67 ENST00000276282.6:-91 uc003wsj.2:-91 BC167810:490 AB016816:496 |chr=chr8 |cpg_percent=0.17 |distance=-67 |distance_to_tss=67 |end=8893554...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |MASL1= |
| − | |chr= | + | |all_trans=HGNC:23762 |
| + | |chr=chr9 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| − | |distance= | + | |distance=257 |
| − | |distance_to_tss= | + | |distance_to_tss=76 |
| − | |end= | + | |end=65736298 |
| + | |end_of_center_position=65736298 | ||
|entrez_id=9258 | |entrez_id=9258 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=LRRC65 | + | |gene_alias=LRRC65{{!}}MASL1{{!}}ROCO4 |
|gene_description=malignant fibrous histiocytoma amplified sequence 1 | |gene_description=malignant fibrous histiocytoma amplified sequence 1 | ||
| − | |gene_id= | + | |gene_id=349334 |
| − | |gene_name= | + | |gene_name=forkhead box D4 like 4 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:23762 |
| − | |gene_symbol= | + | |gene_symbol=FOXD4L4 |
| − | |gene_synonyms= | + | |gene_synonyms=OTTHUMG00000013337 OTTHUMG00000066752 bA460E7.2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:23762 |
|nearest_ensembl=ENSG00000147324 | |nearest_ensembl=ENSG00000147324 | ||
|nearest_promoter_id=NM_004225 | |nearest_promoter_id=NM_004225 | ||
|nearest_refseq=NM_004225 | |nearest_refseq=NM_004225 | ||
|nearest_unigene=Hs.379414 | |nearest_unigene=Hs.379414 | ||
| − | |num_trans= | + | |num_trans=349334 |
|species=human | |species=human | ||
| − | |start= | + | |start=65736297 |
| − | |strand= | + | |start_of_center_position=65736297 |
| − | |transcript_name= | + | |strand=+ |
| + | |transcript_name=ENST00000377413.2 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_243313.1 | |tss_id=hg_243313.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8WXT5 |
}} | }} | ||
Latest revision as of 15:06, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 65736297 |
|---|---|
| End of the center position in the TSS region: | 65736298 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377413.2 |
|---|---|
| Distance: | 257 |
| Num_trans: | 349334 |
| All_trans: | HGNC:23762 |
TATA-Box annotation
| Distance to TSS: | 76 |
|---|---|
| Nearest PromoterID: | NM_004225 |
| Entrez ID: | 9258 |
| Nearest Unigene: | Hs.379414 |
| Nearest Refseq: | NM_004225 |
| Nearest Ensembl: | ENSG00000147324 |
| Gene Name: | forkhead box D4 like 4 |
| Gene Alias: | LRRC65|MASL1|ROCO4 |
| Gene Description: | malignant fibrous histiocytoma amplified sequence 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
