Difference between revisions of "TSS:Hg 243335.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |PARP-5a= |
| − | |chr= | + | |PARP5A= |
| + | |PARPL= | ||
| + | |TIN1= | ||
| + | |TINF1= | ||
| + | |TNKS1= | ||
| + | |all_trans=HGNC:17995 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=64 |
| − | |distance_to_tss= | + | |distance_to_tss=19084 |
| − | |end= | + | |end=74888158 |
| + | |end_of_center_position=74888158 | ||
|entrez_id=8658 | |entrez_id=8658 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=ARTD5 | + | |gene_alias=ARTD5{{!}}PARP-5a{{!}}PARP5A{{!}}PARPL{{!}}TIN1{{!}}TINF1{{!}}TNKS1{{!}}pART5 |
|gene_description=tankyrase | |gene_description=tankyrase | ||
| − | |gene_id= | + | |gene_id=140803 |
| − | |gene_name= | + | |gene_name=transient receptor potential cation channel subfamily M member 6 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:17995 |
| − | |gene_symbol= | + | |gene_symbol=TRPM6 |
| − | |gene_synonyms= | + | |gene_synonyms=CHAK2 FLJ22628 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:17995 |
|nearest_ensembl=ENSG00000173273 | |nearest_ensembl=ENSG00000173273 | ||
|nearest_promoter_id=NM_003747 | |nearest_promoter_id=NM_003747 | ||
|nearest_refseq=NM_003747 | |nearest_refseq=NM_003747 | ||
|nearest_unigene=Hs.370267 | |nearest_unigene=Hs.370267 | ||
| − | |num_trans= | + | |num_trans=140803 |
| + | |pART5= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=74888157 |
| − | |strand= | + | |start_of_center_position=74888157 |
| − | |transcript_name= | + | |strand=- |
| − | |tss_classification= | + | |transcript_name=ENST00000359047.2 AF350881 AK057748 |
| + | |tss_classification=yes | ||
|tss_id=hg_243335.1 | |tss_id=hg_243335.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q96LV9 |
}} | }} | ||
Latest revision as of 15:07, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74888157 |
|---|---|
| End of the center position in the TSS region: | 74888158 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000359047.2 AF350881 AK057748 |
|---|---|
| Distance: | 64 |
| Num_trans: | 140803 |
| All_trans: | HGNC:17995 |
TATA-Box annotation
| Distance to TSS: | 19084 |
|---|---|
| Nearest PromoterID: | NM_003747 |
| Entrez ID: | 8658 |
| Nearest Unigene: | Hs.370267 |
| Nearest Refseq: | NM_003747 |
| Nearest Ensembl: | ENSG00000173273 |
| Gene Name: | transient receptor potential cation channel subfamily M member 6 |
| Gene Alias: | ARTD5|PARP-5a|PARP5A|PARPL|TIN1|TINF1|TNKS1|pART5 |
| Gene Description: | tankyrase |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
