Difference between revisions of "TSS:Hg 243374.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |EHM2= | ||
|all_trans=AF153416:-12 AF153418:-12 ENST00000374566.7:-238 ENST00000374557.4:-238 NM_019114:-238 NM_018424:-238 uc004bdz.3:-238 uc004bea.5:-238 AB032179:-238 BC156131:280 | |all_trans=AF153416:-12 AF153418:-12 ENST00000374566.7:-238 ENST00000374557.4:-238 NM_019114:-238 NM_018424:-238 uc004bdz.3:-238 uc004bea.5:-238 AB032179:-238 BC156131:280 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=238 | |distance_to_tss=238 | ||
| − | |end= | + | |end=91021731 |
| + | |end_of_center_position=91021726 | ||
|entrez_id=54566 | |entrez_id=54566 | ||
|gc_percent=0.880597 | |gc_percent=0.880597 | ||
| − | |gene_alias=CG1 | + | |gene_alias=CG1{{!}}EHM2 |
|gene_description=erythrocyte membrane protein band 4.1 like 4B | |gene_description=erythrocyte membrane protein band 4.1 like 4B | ||
|gene_id=54566 | |gene_id=54566 | ||
| − | |gene_name= | + | |gene_name=EPB41L4B |
|gene_source=HGNC:19818 | |gene_source=HGNC:19818 | ||
|gene_symbol=EPB41L4B | |gene_symbol=EPB41L4B | ||
| Line 18: | Line 20: | ||
|hgnc_mgi_id=HGNC:19818 | |hgnc_mgi_id=HGNC:19818 | ||
|nearest_ensembl=ENSG00000095203 | |nearest_ensembl=ENSG00000095203 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_019114 |
|nearest_refseq=NM_018424 | |nearest_refseq=NM_018424 | ||
|nearest_unigene=Hs.591901 | |nearest_unigene=Hs.591901 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=91021720 |
| + | |start_of_center_position=91021725 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_243374.1 | |tss_id=hg_243374.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 12:49, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91021725 |
|---|---|
| End of the center position in the TSS region: | 91021726 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | AF153416:-12 AF153418:-12 ENST00000374566.7:-238 ENST00000374557.4:-238 NM_019114:-238 NM_018424:-238 uc004bdz.3:-238 uc004bea.5:-238 AB032179:-238 BC156131:280 |
TATA-Box annotation
| Distance to TSS: | 238 |
|---|---|
| Nearest PromoterID: | NM_019114 |
| Entrez ID: | 54566 |
| Nearest Unigene: | Hs.591901 |
| Nearest Refseq: | NM_018424 |
| Nearest Ensembl: | ENSG00000095203 |
| Gene Name: | EPB41L4B |
| Gene Alias: | CG1|EHM2 |
| Gene Description: | erythrocyte membrane protein band 4.1 like 4B |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.880597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
