Difference between revisions of "TSS:Hg 101257.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=236 |entrez_id=23552 |gc_percent=0.651741 |gene_alias=CCRK|CDCH|P42|PNQALRE |gene_description=cyclin dependent kinase 20 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CDCH= | ||
| + | |P42= | ||
| + | |PNQALRE= | ||
| + | |all_trans=HGNC:21420 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-11 | ||
| + | |end=87974573 | ||
| + | |end_of_center_position=87974544 | ||
|entrez_id=23552 | |entrez_id=23552 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=CCRK | + | |gene_alias=CCRK{{!}}CDCH{{!}}P42{{!}}PNQALRE |
|gene_description=cyclin dependent kinase 20 | |gene_description=cyclin dependent kinase 20 | ||
| − | |gene_name=CDK20 | + | |gene_id=23552 |
| + | |gene_name=cyclin dependent kinase 20 | ||
| + | |gene_source=HGNC:21420 | ||
| + | |gene_symbol=CDK20 | ||
| + | |gene_synonyms=p42 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:21420 | ||
|nearest_ensembl=ENSG00000156345 | |nearest_ensembl=ENSG00000156345 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001170639 |
|nearest_refseq=NM_012119 | |nearest_refseq=NM_012119 | ||
|nearest_unigene=Hs.522274 | |nearest_unigene=Hs.522274 | ||
| + | |num_trans=23552 | ||
| + | |species=human | ||
| + | |start=87974514 | ||
| + | |start_of_center_position=87974543 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000325303.9 ENST00000603475.1 ENST00000604175.5 ENST00000605591.1 AK075325 AK226135 AK294193 AK298993 AK296328 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101257.1 | |tss_id=hg_101257.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DFP8 B4DK07 Q8IZL9 | ||
}} | }} | ||
Latest revision as of 18:01, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 87974543 |
|---|---|
| End of the center position in the TSS region: | 87974544 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000325303.9 ENST00000603475.1 ENST00000604175.5 ENST00000605591.1 AK075325 AK226135 AK294193 AK298993 AK296328 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23552 |
| All_trans: | HGNC:21420 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NM_001170639 |
| Entrez ID: | 23552 |
| Nearest Unigene: | Hs.522274 |
| Nearest Refseq: | NM_012119 |
| Nearest Ensembl: | ENSG00000156345 |
| Gene Name: | cyclin dependent kinase 20 |
| Gene Alias: | CCRK|CDCH|P42|PNQALRE |
| Gene Description: | cyclin dependent kinase 20 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
