Difference between revisions of "TSS:Hg 243527.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_004479:-4 BC086312:-4 ENST00000314412.6:-174 uc004ckq.3:-174 BC032357:-174 AK313124:362 |chr=chr9 |cpg_percent=0.025 |distance=-4 |distance_to_tss=4...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AB462505:-73 DQ596276:209 BC009316:-251 DQ598641:437 AB026838:437 LX251243:437 LZ235584:437 S55822:437 AK026170:-479 |
| − | |chr= | + | |chr=chrM |
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance=- | + | |distance=-73 |
|distance_to_tss=4 | |distance_to_tss=4 | ||
| − | |end= | + | |end=2793 |
| + | |end_of_center_position=2789 | ||
|entrez_id=2529 | |entrez_id=2529 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 11: | Line 12: | ||
|gene_description=fucosyltransferase 7 | |gene_description=fucosyltransferase 7 | ||
|gene_id=2529 | |gene_id=2529 | ||
| − | |gene_name= | + | |gene_name=FUT7 |
|gene_source=HGNC:4018 | |gene_source=HGNC:4018 | ||
|gene_symbol=FUT7 | |gene_symbol=FUT7 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_004479 | |nearest_refseq=NM_004479 | ||
|nearest_unigene=Hs.457 | |nearest_unigene=Hs.457 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
| − | |start= | + | |start=2784 |
| − | |strand= | + | |start_of_center_position=2788 |
| − | |transcript_name= | + | |strand=+ |
| + | |transcript_name=AB462505 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_243527.1 | |tss_id=hg_243527.1 | ||
Latest revision as of 12:52, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 2788 |
|---|---|
| End of the center position in the TSS region: | 2789 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB462505 |
|---|---|
| Distance: | -73 |
| Num_trans: | 9 |
| All_trans: | AB462505:-73 DQ596276:209 BC009316:-251 DQ598641:437 AB026838:437 LX251243:437 LZ235584:437 S55822:437 AK026170:-479 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_004479 |
| Entrez ID: | 2529 |
| Nearest Unigene: | Hs.457 |
| Nearest Refseq: | NM_004479 |
| Nearest Ensembl: | ENSG00000180549 |
| Gene Name: | FUT7 |
| Gene Alias: | FucT-VII |
| Gene Description: | fucosyltransferase 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
