Difference between revisions of "TSS:Hg 29683.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK127156:383 |chr=chr2 |cpg_percent=0.07 |distance=383 |distance_to_tss=327 |end=95026012 |entrez_id=4118 |gc_percent=0.671642 |gene_alias=- |gene_descr...") |
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|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=383 | |distance=383 | ||
| − | |distance_to_tss= | + | |distance_to_tss=274 |
|end=95026012 | |end=95026012 | ||
| + | |end_of_center_position=95025982 | ||
|entrez_id=4118 | |entrez_id=4118 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias= | + | |gene_alias=MVP17{{!}}VIP17 |
| − | |gene_description= | + | |gene_description=mal, T cell differentiation protein |
|gene_id=100131662 | |gene_id=100131662 | ||
| − | |gene_name= | + | |gene_name=MAL |
|gene_source=EntrezGene:100131662 | |gene_source=EntrezGene:100131662 | ||
|gene_symbol=LOC100131662 | |gene_symbol=LOC100131662 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000172005 | |nearest_ensembl=ENSG00000172005 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_002371 |
|nearest_refseq=NM_002371 | |nearest_refseq=NM_002371 | ||
|nearest_unigene=Hs.80395 | |nearest_unigene=Hs.80395 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=95025951 | |start=95025951 | ||
| + | |start_of_center_position=95025981 | ||
|strand=- | |strand=- | ||
|transcript_name=AK127156 | |transcript_name=AK127156 | ||
Latest revision as of 19:03, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 95025981 |
|---|---|
| End of the center position in the TSS region: | 95025982 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK127156 |
|---|---|
| Distance: | 383 |
| Num_trans: | 1 |
| All_trans: | AK127156:383 |
TATA-Box annotation
| Distance to TSS: | 274 |
|---|---|
| Nearest PromoterID: | NM_002371 |
| Entrez ID: | 4118 |
| Nearest Unigene: | Hs.80395 |
| Nearest Refseq: | NM_002371 |
| Nearest Ensembl: | ENSG00000172005 |
| Gene Name: | MAL |
| Gene Alias: | MVP17|VIP17 |
| Gene Description: | mal, T cell differentiation protein |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
