Difference between revisions of "TSS:Hg 30612.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK125976:429 |chr=chr2 |cpg_percent=0.025 |distance=429 |distance_to_tss=-115965 |end=129807212 |entrez_id=101927924 |gc_percent=0.507463 |gene_alias=-...") |
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|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=429 | |distance=429 | ||
| − | |distance_to_tss= | + | |distance_to_tss=70279 |
|end=129807212 | |end=129807212 | ||
| − | |entrez_id= | + | |end_of_center_position=129807212 |
| + | |entrez_id=105373615 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=long intergenic non-protein coding RNA | + | |gene_description=long intergenic non-protein coding RNA 2572 |
|gene_id=100131048 | |gene_id=100131048 | ||
| − | |gene_name= | + | |gene_name=LINC02572 |
|gene_source=EntrezGene:100131048 | |gene_source=EntrezGene:100131048 | ||
|gene_symbol=LOC100131048 | |gene_symbol=LOC100131048 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_149127 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_149127 |
| − | |nearest_unigene= | + | |nearest_unigene= |
|num_trans=1 | |num_trans=1 | ||
|species=human | |species=human | ||
|start=129807211 | |start=129807211 | ||
| + | |start_of_center_position=129807211 | ||
|strand=- | |strand=- | ||
|transcript_name=AK125976 | |transcript_name=AK125976 | ||
Latest revision as of 19:25, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 129807211 |
|---|---|
| End of the center position in the TSS region: | 129807212 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK125976 |
|---|---|
| Distance: | 429 |
| Num_trans: | 1 |
| All_trans: | AK125976:429 |
TATA-Box annotation
| Distance to TSS: | 70279 |
|---|---|
| Nearest PromoterID: | NR_149127 |
| Entrez ID: | 105373615 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_149127 |
| Nearest Ensembl: | |
| Gene Name: | LINC02572 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2572 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
