Difference between revisions of "TSS:Hg 3079.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000403491.7:12 NM_005595:12 NM_001134673:12 uc001czw.4:12 AB037860:12 AK299356:271 ENST00000371187.7:325 uc001czv.4:325 BC022264:327 ENST000003711...") |
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |NF-I/A= |
| + | |NF1-A= | ||
| + | |NFI-A= | ||
| + | |NFI-L= | ||
| + | |all_trans=HGNC:7784 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=12 | |distance=12 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-302 |
|end=61082296 | |end=61082296 | ||
| + | |end_of_center_position=61082260 | ||
|entrez_id=4774 | |entrez_id=4774 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=CTF | + | |gene_alias=BRMUTD{{!}}CTF{{!}}NF-I/A{{!}}NF1-A{{!}}NFI-A{{!}}NFI-L |
|gene_description=nuclear factor I A | |gene_description=nuclear factor I A | ||
|gene_id=4774 | |gene_id=4774 | ||
| − | |gene_name=nuclear factor I | + | |gene_name=nuclear factor I A |
|gene_source=HGNC:7784 | |gene_source=HGNC:7784 | ||
|gene_symbol=NFIA | |gene_symbol=NFIA | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_005595 | |nearest_refseq=NM_005595 | ||
|nearest_unigene=Hs.740757 | |nearest_unigene=Hs.740757 | ||
| − | |num_trans= | + | |num_trans=4774 |
|species=human | |species=human | ||
|start=61082222 | |start=61082222 | ||
| + | |start_of_center_position=61082259 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AB037860 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_3079.1 | |tss_id=hg_3079.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 17:43, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 61082259 |
|---|---|
| End of the center position in the TSS region: | 61082260 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB037860 |
|---|---|
| Distance: | 12 |
| Num_trans: | 4774 |
| All_trans: | HGNC:7784 |
TATA-Box annotation
| Distance to TSS: | -302 |
|---|---|
| Nearest PromoterID: | NM_005595 |
| Entrez ID: | 4774 |
| Nearest Unigene: | Hs.740757 |
| Nearest Refseq: | NM_005595 |
| Nearest Ensembl: | ENSG00000162599 |
| Gene Name: | nuclear factor I A |
| Gene Alias: | BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L |
| Gene Description: | nuclear factor I A |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
