Difference between revisions of "TSS:Hg 35995.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK057559:-240 ENST00000421492.5 | + | |R3HDM3= |
| + | |RCS= | ||
| + | |TARPP= | ||
| + | |all_trans=AK057559:-240 ENST00000421492.5:309 ENST00000428373.5:-355 BC041385:-355 NM_001267616:-419 NM_001267619:-419 NM_001385491:-419 NM_001385492:-419 NM_001385495:-419 NM_001385496:-419 NM_001385497:-419 NM_001385517:-419 NM_001385536:-419 NM_001385555:-419 NM_001385556:-419 NM_001385558:-419 NM_001385561:-419 NM_001385562:-419 NM_001385563:-419 NM_001385564:-419 NR_169632:-419 NR_169633:-419 NR_169635:-419 NR_169644:-419 NR_169645:-419 NR_169647:-419 | ||
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=-240 | |distance=-240 | ||
| − | |distance_to_tss= | + | |distance_to_tss=420 |
|end=35639946 | |end=35639946 | ||
| + | |end_of_center_position=35639945 | ||
|entrez_id=10777 | |entrez_id=10777 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=ARPP-21 | + | |gene_alias=ARPP-21{{!}}R3HDM3{{!}}RCS{{!}}TARPP |
|gene_description=cAMP regulated phosphoprotein 21 | |gene_description=cAMP regulated phosphoprotein 21 | ||
|gene_id=100130503 | |gene_id=100130503 | ||
| − | |gene_name= | + | |gene_name=ARPP21 |
|gene_source=EntrezGene:100130503 | |gene_source=EntrezGene:100130503 | ||
|gene_symbol=LOC100130503 | |gene_symbol=LOC100130503 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_016300 | |nearest_refseq=NM_016300 | ||
|nearest_unigene=Hs.475902 | |nearest_unigene=Hs.475902 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=35639943 | |start=35639943 | ||
| + | |start_of_center_position=35639944 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK057559 | |transcript_name=AK057559 | ||
Latest revision as of 21:27, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35639944 |
|---|---|
| End of the center position in the TSS region: | 35639945 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK057559 |
|---|---|
| Distance: | -240 |
| Num_trans: | 26 |
| All_trans: | AK057559:-240 ENST00000421492.5:309 ENST00000428373.5:-355 BC041385:-355 NM_001267616:-419 NM_001267619:-419 NM_001385491:-419 NM_001385492:-419 NM_001385495:-419 NM_001385496:-419 NM_001385497:-419 NM_001385517:-419 NM_001385536:-419 NM_001385555:-419 NM_001385556:-419 NM_001385558:-419 NM_001385561:-419 NM_001385562:-419 NM_001385563:-419 NM_001385564:-419 NR_169632:-419 NR_169633:-419 NR_169635:-419 NR_169644:-419 NR_169645:-419 NR_169647:-419 |
TATA-Box annotation
| Distance to TSS: | 420 |
|---|---|
| Nearest PromoterID: | NM_001267616 |
| Entrez ID: | 10777 |
| Nearest Unigene: | Hs.475902 |
| Nearest Refseq: | NM_016300 |
| Nearest Ensembl: | ENSG00000172995 |
| Gene Name: | ARPP21 |
| Gene Alias: | ARPP-21|R3HDM3|RCS|TARPP |
| Gene Description: | cAMP regulated phosphoprotein 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
