Difference between revisions of "TSS:Hg 101423.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=109 |entrez_id=4969 |gc_percent=0.427861 |gene_alias=OG|OIF|SLRR3A |gene_description=osteoglycin |gene_name=OGN |gene_type=prot...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |OIF= | ||
| + | |SLRR3A= | ||
| + | |all_trans=HGNC:8126 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss= | + | |distance=10 |
| + | |distance_to_tss=-12 | ||
| + | |end=92404592 | ||
| + | |end_of_center_position=92404590 | ||
|entrez_id=4969 | |entrez_id=4969 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=OG | + | |gene_alias=OG{{!}}OIF{{!}}SLRR3A |
|gene_description=osteoglycin | |gene_description=osteoglycin | ||
| − | |gene_name=OGN | + | |gene_id=4969 |
| + | |gene_name=osteoglycin | ||
| + | |gene_source=HGNC:8126 | ||
| + | |gene_symbol=OGN | ||
| + | |gene_synonyms=OIF SLRR3A mimecan | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:8126 | ||
|nearest_ensembl=ENSG00000106809 | |nearest_ensembl=ENSG00000106809 | ||
|nearest_promoter_id=NM_014057 | |nearest_promoter_id=NM_014057 | ||
|nearest_refseq=NM_014057 | |nearest_refseq=NM_014057 | ||
|nearest_unigene=Hs.109439 | |nearest_unigene=Hs.109439 | ||
| + | |num_trans=4969 | ||
| + | |species=human | ||
| + | |start=92404587 | ||
| + | |start_of_center_position=92404589 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375561.10 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101423.1 | |tss_id=hg_101423.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A8K0R3 Q7Z532 | ||
}} | }} | ||
Latest revision as of 18:04, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92404589 |
|---|---|
| End of the center position in the TSS region: | 92404590 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375561.10 |
|---|---|
| Distance: | 10 |
| Num_trans: | 4969 |
| All_trans: | HGNC:8126 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_014057 |
| Entrez ID: | 4969 |
| Nearest Unigene: | Hs.109439 |
| Nearest Refseq: | NM_014057 |
| Nearest Ensembl: | ENSG00000106809 |
| Gene Name: | osteoglycin |
| Gene Alias: | OG|OIF|SLRR3A |
| Gene Description: | osteoglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
