Difference between revisions of "TSS:Hg 4826.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK293689:3 ENST00000463382.1:-16 uc057jrw.1:-16 |chr=chr1 |cpg_percent=0.03 |distance=3 |distance_to_tss=3968 |end=116387358 |entrez_id=476 |gc_percent=...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK293689:3 ENST00000463382.1:-16 | + | |all_trans=LF352797:0 MA588374:0 AK293689:3 ENST00000463382.1:-16 LF352796:417 MA588373:417 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=3968 | |distance_to_tss=3968 | ||
|end=116387358 | |end=116387358 | ||
| + | |end_of_center_position=116387339 | ||
|entrez_id=476 | |entrez_id=476 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias= | + | |gene_alias=CMT2DD{{!}}HOMGSMR2 |
|gene_description=ATPase Na+/K+ transporting subunit alpha 1 | |gene_description=ATPase Na+/K+ transporting subunit alpha 1 | ||
|gene_id=476 | |gene_id=476 | ||
| − | |gene_name= | + | |gene_name=ATP1A1 |
|gene_source=HGNC:799 | |gene_source=HGNC:799 | ||
|gene_symbol=ATP1A1 | |gene_symbol=ATP1A1 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_000701 | |nearest_refseq=NM_000701 | ||
|nearest_unigene=Hs.371889 | |nearest_unigene=Hs.371889 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=116387318 | |start=116387318 | ||
| + | |start_of_center_position=116387338 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF352797 MA588374 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_4826.1 | |tss_id=hg_4826.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B7Z1N5 | |uniprot_id=B7Z1N5 | ||
}} | }} | ||
Latest revision as of 21:11, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 116387338 |
|---|---|
| End of the center position in the TSS region: | 116387339 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF352797 MA588374 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | LF352797:0 MA588374:0 AK293689:3 ENST00000463382.1:-16 LF352796:417 MA588373:417 |
TATA-Box annotation
| Distance to TSS: | 3968 |
|---|---|
| Nearest PromoterID: | NM_001160234 |
| Entrez ID: | 476 |
| Nearest Unigene: | Hs.371889 |
| Nearest Refseq: | NM_000701 |
| Nearest Ensembl: | ENSG00000163399 |
| Gene Name: | ATP1A1 |
| Gene Alias: | CMT2DD|HOMGSMR2 |
| Gene Description: | ATPase Na+/K+ transporting subunit alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
