Difference between revisions of "TSS:Hg 54122.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000608178.5:0 NR_033939:0 uc003iie.4:0 ENST00000512692.6:17 uc062zti.1:17 AK095554:17 ENST00000609616.1:23 uc062ztk.1:23 |chr=chr4 |cpg_percent=0....") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:50601 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-2 | |distance_to_tss=-2 | ||
|end=140373411 | |end=140373411 | ||
| + | |end_of_center_position=140373394 | ||
|entrez_id=100129858 | |entrez_id=100129858 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_033939 | |nearest_refseq=NR_033939 | ||
|nearest_unigene=Hs.660477 | |nearest_unigene=Hs.660477 | ||
| − | |num_trans= | + | |num_trans=100129858 |
|species=human | |species=human | ||
|start=140373376 | |start=140373376 | ||
| + | |start_of_center_position=140373393 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000608178.5 | + | |transcript_name=ENST00000512692.7 ENST00000658255.1 ENST00000608178.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_54122.1 | |tss_id=hg_54122.1 | ||
Latest revision as of 02:08, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 140373393 |
|---|---|
| End of the center position in the TSS region: | 140373394 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000512692.7 ENST00000658255.1 ENST00000608178.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100129858 |
| All_trans: | HGNC:50601 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NR_033939 |
| Entrez ID: | 100129858 |
| Nearest Unigene: | Hs.660477 |
| Nearest Refseq: | NR_033939 |
| Nearest Ensembl: | ENSG00000196951 |
| Gene Name: | SCOC antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | SCOC antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
