Difference between revisions of "TSS:Hg 101586.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |NAG11= | ||
| + | |NAG12= | ||
| + | |all_trans=HGNC:27858 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=-11 | |distance_to_tss=-11 | ||
| + | |end=95876024 | ||
| + | |end_of_center_position=95875988 | ||
|entrez_id=100128782 | |entrez_id=100128782 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=C9orf130 | + | |gene_alias=C9orf130{{!}}NAG11{{!}}NAG12 |
|gene_description=long intergenic non-protein coding RNA 476 | |gene_description=long intergenic non-protein coding RNA 476 | ||
| − | |gene_name=LINC00476 | + | |gene_id=100128782 |
| + | |gene_name=long intergenic non-protein coding RNA 476 | ||
| + | |gene_source=HGNC:27858 | ||
| + | |gene_symbol=LINC00476 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:27858 | ||
|nearest_ensembl=ENSG00000175611 | |nearest_ensembl=ENSG00000175611 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_023389 |
|nearest_refseq=NR_023389 | |nearest_refseq=NR_023389 | ||
|nearest_unigene=Hs.494549 | |nearest_unigene=Hs.494549 | ||
| + | |num_trans=100128782 | ||
| + | |species=human | ||
| + | |start=95875951 | ||
| + | |start_of_center_position=95875987 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000660645.1 ENST00000321517.3 AL389954 AF194971 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101586.1 | |tss_id=hg_101586.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:08, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 95875987 |
|---|---|
| End of the center position in the TSS region: | 95875988 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000660645.1 ENST00000321517.3 AL389954 AF194971 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100128782 |
| All_trans: | HGNC:27858 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NR_023389 |
| Entrez ID: | 100128782 |
| Nearest Unigene: | Hs.494549 |
| Nearest Refseq: | NR_023389 |
| Nearest Ensembl: | ENSG00000175611 |
| Gene Name: | long intergenic non-protein coding RNA 476 |
| Gene Alias: | C9orf130|NAG11|NAG12 |
| Gene Description: | long intergenic non-protein coding RNA 476 |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
