Difference between revisions of "TSS:Hg 101608.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:16881 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| + | |distance=32 | ||
|distance_to_tss=-35 | |distance_to_tss=-35 | ||
| + | |end=96655355 | ||
| + | |end_of_center_position=96655352 | ||
|entrez_id=195827 | |entrez_id=195827 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=C9orf21 | + | |gene_alias=AAED1{{!}}C9orf21 |
| − | |gene_description= | + | |gene_description=peroxiredoxin like 2C |
| − | |gene_name= | + | |gene_id=195827 |
| + | |gene_name=peroxiredoxin like 2C | ||
| + | |gene_source=HGNC:16881 | ||
| + | |gene_symbol=PRXL2C | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16881 | ||
|nearest_ensembl=ENSG00000158122 | |nearest_ensembl=ENSG00000158122 | ||
|nearest_promoter_id=NM_153698 | |nearest_promoter_id=NM_153698 | ||
|nearest_refseq=NM_153698 | |nearest_refseq=NM_153698 | ||
|nearest_unigene=Hs.44640 | |nearest_unigene=Hs.44640 | ||
| + | |num_trans=195827 | ||
| + | |species=human | ||
| + | |start=96655348 | ||
| + | |start_of_center_position=96655351 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375234.8 BC136501 BC136503 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101608.1 | |tss_id=hg_101608.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B7ZKK1 Q7RTV5 | ||
}} | }} | ||
Latest revision as of 18:08, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 96655351 |
|---|---|
| End of the center position in the TSS region: | 96655352 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000375234.8 BC136501 BC136503 |
|---|---|
| Distance: | 32 |
| Num_trans: | 195827 |
| All_trans: | HGNC:16881 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_153698 |
| Entrez ID: | 195827 |
| Nearest Unigene: | Hs.44640 |
| Nearest Refseq: | NM_153698 |
| Nearest Ensembl: | ENSG00000158122 |
| Gene Name: | peroxiredoxin like 2C |
| Gene Alias: | AAED1|C9orf21 |
| Gene Description: | peroxiredoxin like 2C |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
