Difference between revisions of "TSS:Hg 101628.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |NCBP= | ||
| + | |Sto1= | ||
| + | |all_trans=HGNC:30087 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance_to_tss=- | + | |distance=0 |
| − | |entrez_id= | + | |distance_to_tss=-4 |
| + | |end=97633400 | ||
| + | |end_of_center_position=97633372 | ||
| + | |entrez_id=158427 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias= | + | |gene_alias=C9orf97 |
| − | | | + | |gene_description=thiosulfate sulfurtransferase like domain containing 2 |
| − | | | + | |gene_id=158427 |
| + | |gene_name=thiosulfate sulfurtransferase like domain containing 2 | ||
| + | |gene_source=HGNC:30087 | ||
| + | |gene_symbol=TSTD2 | ||
| + | |gene_synonyms=PP4189 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:30087 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000136925 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NM_139246 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NM_139246 |
| − | |tata_box= | + | |nearest_unigene=Hs.723236 |
| + | |num_trans=158427 | ||
| + | |species=human | ||
| + | |start=97633343 | ||
| + | |start_of_center_position=97633371 | ||
| + | |strand=- | ||
| + | |tata_box=15(GCTTTTCTACCC,+,0.00) | ||
| + | |transcript_name=ENST00000341170.5 AK128615 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101628.1 | |tss_id=hg_101628.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T7W7 | ||
}} | }} | ||
Latest revision as of 18:09, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 97633371 |
|---|---|
| End of the center position in the TSS region: | 97633372 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000341170.5 AK128615 |
|---|---|
| Distance: | 0 |
| Num_trans: | 158427 |
| All_trans: | HGNC:30087 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_139246 |
| Entrez ID: | 158427 |
| Nearest Unigene: | Hs.723236 |
| Nearest Refseq: | NM_139246 |
| Nearest Ensembl: | ENSG00000136925 |
| Gene Name: | thiosulfate sulfurtransferase like domain containing 2 |
| Gene Alias: | C9orf97 |
| Gene Description: | thiosulfate sulfurtransferase like domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 15(GCTTTTCTACCC,+,0.00) |
