Difference between revisions of "TSS:Hg 60513.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000511650 | + | |PROP-1= |
| + | |all_trans=NR_149047:0 ENST00000511650.1:80 | ||
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=177939542 | |end=177939542 | ||
| − | |entrez_id= | + | |end_of_center_position=177939528 |
| + | |entrez_id=100128340 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uncharacterized LOC100128340 |
| − | |gene_name= | + | |gene_id=100128340 |
| − | |gene_type= | + | |gene_name=uncharacterized LOC100128340 |
| − | |nearest_ensembl= | + | |gene_source=EntrezGene:100128340 |
| − | |nearest_promoter_id= | + | |gene_symbol=LOC100128340 |
| − | |nearest_refseq= | + | |gene_synonyms= |
| − | |nearest_unigene=Hs. | + | |gene_type=ncRNA |
| + | |hgnc_mgi_id= | ||
| + | |nearest_ensembl= | ||
| + | |nearest_promoter_id=NR_149047 | ||
| + | |nearest_refseq=NR_149047 | ||
| + | |nearest_unigene=Hs.710582 | ||
|num_trans=2 | |num_trans=2 | ||
|species=human | |species=human | ||
|start=177939513 | |start=177939513 | ||
| + | |start_of_center_position=177939527 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NR_149047.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_60513.1 | |tss_id=hg_60513.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 04:27, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 177939527 |
|---|---|
| End of the center position in the TSS region: | 177939528 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_149047.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | NR_149047:0 ENST00000511650.1:80 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NR_149047 |
| Entrez ID: | 100128340 |
| Nearest Unigene: | Hs.710582 |
| Nearest Refseq: | NR_149047 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100128340 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128340 |
| Gene Type: | ncRNA |
| CpG%: | 0.1 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
