Difference between revisions of "TSS:Hg 101678.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |PARIS1= | ||
| + | |TBC1D2A= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=6755 | ||
| + | |end=98248909 | ||
| + | |end_of_center_position=98248895 | ||
|entrez_id=55357 | |entrez_id=55357 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias=PARIS-1 | + | |gene_alias=PARIS-1{{!}}PARIS1{{!}}TBC1D2A |
|gene_description=TBC1 domain family member 2 | |gene_description=TBC1 domain family member 2 | ||
|gene_name=TBC1D2 | |gene_name=TBC1D2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000095383 | |nearest_ensembl=ENSG00000095383 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_051978 |
|nearest_refseq=NM_018421 | |nearest_refseq=NM_018421 | ||
|nearest_unigene=Hs.371016 | |nearest_unigene=Hs.371016 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=98248879 | ||
| + | |start_of_center_position=98248894 | ||
| + | |strand=- | ||
| + | |tata_box=-27(CTGCTTTTAAGG,-,0.00),-25(GCTTTTAAGGAT,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_101678.1 | |tss_id=hg_101678.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:45, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 98248894 |
|---|---|
| End of the center position in the TSS region: | 98248895 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 6755 |
|---|---|
| Nearest PromoterID: | NR_051978 |
| Entrez ID: | 55357 |
| Nearest Unigene: | Hs.371016 |
| Nearest Refseq: | NM_018421 |
| Nearest Ensembl: | ENSG00000095383 |
| Gene Name: | TBC1D2 |
| Gene Alias: | PARIS-1|PARIS1|TBC1D2A |
| Gene Description: | TBC1 domain family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -27(CTGCTTTTAAGG,-,0.00),-25(GCTTTTAAGGAT,+,0.00) |
