Difference between revisions of "TSS:Hg 101683.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=-5 |entrez_id=55357 |gc_percent=0.716418 |gene_alias=PARIS-1|PARIS1|TBC1D2A |gene_description=TBC1 domain family member 2 |gene_...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PARIS1= | ||
| + | |TBC1D2A= | ||
| + | |all_trans=HGNC:18026 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance_to_tss=- | + | |distance=48 |
| + | |distance_to_tss=-77 | ||
| + | |end=98255755 | ||
| + | |end_of_center_position=98255726 | ||
|entrez_id=55357 | |entrez_id=55357 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=PARIS-1 | + | |gene_alias=PARIS-1{{!}}PARIS1{{!}}TBC1D2A |
|gene_description=TBC1 domain family member 2 | |gene_description=TBC1 domain family member 2 | ||
| − | |gene_name=TBC1D2 | + | |gene_id=55357 |
| + | |gene_name=TBC1 domain family member 2 | ||
| + | |gene_source=HGNC:18026 | ||
| + | |gene_symbol=TBC1D2 | ||
| + | |gene_synonyms=Armus PARIS1 TBC1D2A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18026 | ||
|nearest_ensembl=ENSG00000095383 | |nearest_ensembl=ENSG00000095383 | ||
|nearest_promoter_id=NM_018421 | |nearest_promoter_id=NM_018421 | ||
|nearest_refseq=NM_018421 | |nearest_refseq=NM_018421 | ||
|nearest_unigene=Hs.371016 | |nearest_unigene=Hs.371016 | ||
| + | |num_trans=55357 | ||
| + | |species=human | ||
| + | |start=98255696 | ||
| + | |start_of_center_position=98255725 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000465784.7 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101683.1 | |tss_id=hg_101683.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9BYX2 | ||
}} | }} | ||
Latest revision as of 18:10, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98255725 |
|---|---|
| End of the center position in the TSS region: | 98255726 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000465784.7 |
|---|---|
| Distance: | 48 |
| Num_trans: | 55357 |
| All_trans: | HGNC:18026 |
TATA-Box annotation
| Distance to TSS: | -77 |
|---|---|
| Nearest PromoterID: | NM_018421 |
| Entrez ID: | 55357 |
| Nearest Unigene: | Hs.371016 |
| Nearest Refseq: | NM_018421 |
| Nearest Ensembl: | ENSG00000095383 |
| Gene Name: | TBC1 domain family member 2 |
| Gene Alias: | PARIS-1|PARIS1|TBC1D2A |
| Gene Description: | TBC1 domain family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
