Difference between revisions of "TSS:Hg 118997.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NR_015384:-26 BC035903:51 BC029949:59 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=-26 | ||
|distance_to_tss=38 | |distance_to_tss=38 | ||
| + | |end=19714646 | ||
| + | |end_of_center_position=19714634 | ||
|entrez_id=100126784 | |entrez_id=100126784 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100126784 | |gene_description=uncharacterized LOC100126784 | ||
| − | |gene_name= | + | |gene_id=100126784 |
| + | |gene_name=NAV2 antisense RNA 6 | ||
| + | |gene_source=HGNC:55264 | ||
| + | |gene_symbol=NAV2-AS6 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:55264 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_015384 | |nearest_promoter_id=NR_015384 | ||
|nearest_refseq=NR_015384 | |nearest_refseq=NR_015384 | ||
|nearest_unigene=Hs.64341 | |nearest_unigene=Hs.64341 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=19714621 | ||
| + | |start_of_center_position=19714633 | ||
| + | |strand=- | ||
| + | |transcript_name=NR_015384.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_118997.1 | |tss_id=hg_118997.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 00:26, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19714633 |
|---|---|
| End of the center position in the TSS region: | 19714634 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_015384.2 |
|---|---|
| Distance: | -26 |
| Num_trans: | 3 |
| All_trans: | NR_015384:-26 BC035903:51 BC029949:59 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NR_015384 |
| Entrez ID: | 100126784 |
| Nearest Unigene: | Hs.64341 |
| Nearest Refseq: | NR_015384 |
| Nearest Ensembl: | |
| Gene Name: | NAV2 antisense RNA 6 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100126784 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
