Difference between revisions of "TSS:Hg 101703.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.185 |distance_to_tss=13 |entrez_id=203286 |gc_percent=0.835821 |gene_alias=ANKRD14|NPHP16|PKDR1|SAMD6 |gene_description=ankyrin repeat and sterile a...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NPHP16= | ||
| + | |PKDR1= | ||
| + | |SAMD6= | ||
| + | |all_trans=HGNC:26724 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=26 | ||
| + | |end=98796562 | ||
| + | |end_of_center_position=98796529 | ||
|entrez_id=203286 | |entrez_id=203286 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=ANKRD14 | + | |gene_alias=ANKRD14{{!}}NPHP16{{!}}PKDR1{{!}}SAMD6 |
|gene_description=ankyrin repeat and sterile alpha motif domain containing 6 | |gene_description=ankyrin repeat and sterile alpha motif domain containing 6 | ||
| − | |gene_name=ANKS6 | + | |gene_id=203286 |
| + | |gene_name=ankyrin repeat and sterile alpha motif domain containing 6 | ||
| + | |gene_source=HGNC:26724 | ||
| + | |gene_symbol=ANKS6 | ||
| + | |gene_synonyms=FLJ36928 NPHP16 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26724 | ||
|nearest_ensembl=ENSG00000165138 | |nearest_ensembl=ENSG00000165138 | ||
|nearest_promoter_id=NM_173551 | |nearest_promoter_id=NM_173551 | ||
|nearest_refseq=NM_173551 | |nearest_refseq=NM_173551 | ||
|nearest_unigene=Hs.406890 | |nearest_unigene=Hs.406890 | ||
| + | |num_trans=203286 | ||
| + | |species=human | ||
| + | |start=98796495 | ||
| + | |start_of_center_position=98796528 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000353234.5 ENST00000471846.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101703.1 | |tss_id=hg_101703.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q68DC2 | ||
}} | }} | ||
Latest revision as of 18:11, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 98796528 |
|---|---|
| End of the center position in the TSS region: | 98796529 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000353234.5 ENST00000471846.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 203286 |
| All_trans: | HGNC:26724 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_173551 |
| Entrez ID: | 203286 |
| Nearest Unigene: | Hs.406890 |
| Nearest Refseq: | NM_173551 |
| Nearest Ensembl: | ENSG00000165138 |
| Gene Name: | ankyrin repeat and sterile alpha motif domain containing 6 |
| Gene Alias: | ANKRD14|NPHP16|PKDR1|SAMD6 |
| Gene Description: | ankyrin repeat and sterile alpha motif domain containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
