Difference between revisions of "TSS:Hg 7587.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CD45= | ||
| + | |CD45R= | ||
| + | |GP180= | ||
| + | |L-CA= | ||
| + | |LCA= | ||
| + | |LY5= | ||
| + | |T200= | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-12195 | |distance_to_tss=-12195 | ||
|end=198626780 | |end=198626780 | ||
| + | |end_of_center_position=198626774 | ||
|entrez_id=5788 | |entrez_id=5788 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=B220 | + | |gene_alias=B220{{!}}CD45{{!}}CD45R{{!}}GP180{{!}}L-CA{{!}}LCA{{!}}LY5{{!}}T200 |
| − | |gene_description= | + | |gene_description=protein tyrosine phosphatase receptor type C |
|gene_name=PTPRC | |gene_name=PTPRC | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000081237 | |nearest_ensembl=ENSG00000081237 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_080921 |
|nearest_refseq=NM_002838 | |nearest_refseq=NM_002838 | ||
|nearest_unigene=Hs.654514 | |nearest_unigene=Hs.654514 | ||
| Line 18: | Line 26: | ||
|species=human | |species=human | ||
|start=198626766 | |start=198626766 | ||
| + | |start_of_center_position=198626773 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 12:55, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 198626773 |
|---|---|
| End of the center position in the TSS region: | 198626774 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -12195 |
|---|---|
| Nearest PromoterID: | NM_080921 |
| Entrez ID: | 5788 |
| Nearest Unigene: | Hs.654514 |
| Nearest Refseq: | NM_002838 |
| Nearest Ensembl: | ENSG00000081237 |
| Gene Name: | PTPRC |
| Gene Alias: | B220|CD45|CD45R|GP180|L-CA|LCA|LY5|T200 |
| Gene Description: | protein tyrosine phosphatase receptor type C |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
