Difference between revisions of "TSS:Hg 79086.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |LAB= |
| + | |NTAL= | ||
| + | |WBSCR15= | ||
| + | |WBSCR5= | ||
| + | |WSCR5= | ||
| + | |all_trans=HGNC:12749 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=12 | |distance=12 | ||
| − | |distance_to_tss= | + | |distance_to_tss=10433 |
|end=74220446 | |end=74220446 | ||
| + | |end_of_center_position=74220440 | ||
|entrez_id=7462 | |entrez_id=7462 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=HSPC046 | + | |gene_alias=HSPC046{{!}}LAB{{!}}NTAL{{!}}WBSCR15{{!}}WBSCR5{{!}}WSCR5 |
| − | |gene_description=linker for activation of T | + | |gene_description=linker for activation of T cells family member 2 |
|gene_id=7462 | |gene_id=7462 | ||
| − | |gene_name=linker for activation of T | + | |gene_name=linker for activation of T cells family member 2 |
|gene_source=HGNC:12749 | |gene_source=HGNC:12749 | ||
|gene_symbol=LAT2 | |gene_symbol=LAT2 | ||
| Line 18: | Line 24: | ||
|hgnc_mgi_id=HGNC:12749 | |hgnc_mgi_id=HGNC:12749 | ||
|nearest_ensembl=ENSG00000086730 | |nearest_ensembl=ENSG00000086730 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_032464 |
|nearest_refseq=NM_014146 | |nearest_refseq=NM_014146 | ||
|nearest_unigene=Hs.741249 | |nearest_unigene=Hs.741249 | ||
| − | |num_trans= | + | |num_trans=7462 |
|species=human | |species=human | ||
|start=74220432 | |start=74220432 | ||
| + | |start_of_center_position=74220439 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000490586 | + | |transcript_name=ENST00000490586.1 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_79086.1 | |tss_id=hg_79086.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:09, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74220439 |
|---|---|
| End of the center position in the TSS region: | 74220440 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000490586.1 |
|---|---|
| Distance: | 12 |
| Num_trans: | 7462 |
| All_trans: | HGNC:12749 |
TATA-Box annotation
| Distance to TSS: | 10433 |
|---|---|
| Nearest PromoterID: | NM_032464 |
| Entrez ID: | 7462 |
| Nearest Unigene: | Hs.741249 |
| Nearest Refseq: | NM_014146 |
| Nearest Ensembl: | ENSG00000086730 |
| Gene Name: | linker for activation of T cells family member 2 |
| Gene Alias: | HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 |
| Gene Description: | linker for activation of T cells family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
