Difference between revisions of "TSS:Hg 82389.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000453823.5:-10 uc064avd.1:-10 ENST00000449296.6:272 ENST00000446141.5:272 NM_001284310:272 uc003sjn.5:272 uc064auw.1:272 AK092471:272 ENST0000049...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |GCS1L= |
| + | |all_trans=HGNC:16486 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-280 | |distance_to_tss=-280 | ||
|end=927504 | |end=927504 | ||
| + | |end_of_center_position=927496 | ||
|entrez_id=11033 | |entrez_id=11033 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=CENTA1 | + | |gene_alias=CENTA1{{!}}GCS1L{{!}}p42IP4 |
|gene_description=ArfGAP with dual PH domains 1 | |gene_description=ArfGAP with dual PH domains 1 | ||
|gene_id=11033 | |gene_id=11033 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_006869 | |nearest_refseq=NM_006869 | ||
|nearest_unigene=Hs.602573 | |nearest_unigene=Hs.602573 | ||
| − | |num_trans= | + | |num_trans=11033 |
| + | |p42IP4= | ||
|species=human | |species=human | ||
|start=927487 | |start=927487 | ||
| + | |start_of_center_position=927495 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000453823.5 | + | |transcript_name=ENST00000453823.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_82389.1 | |tss_id=hg_82389.1 | ||
Latest revision as of 12:21, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 927495 |
|---|---|
| End of the center position in the TSS region: | 927496 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000453823.5 |
|---|---|
| Distance: | -10 |
| Num_trans: | 11033 |
| All_trans: | HGNC:16486 |
TATA-Box annotation
| Distance to TSS: | -280 |
|---|---|
| Nearest PromoterID: | NM_001284310 |
| Entrez ID: | 11033 |
| Nearest Unigene: | Hs.602573 |
| Nearest Refseq: | NM_006869 |
| Nearest Ensembl: | ENSG00000105963 |
| Gene Name: | ArfGAP with dual PH domains 1 |
| Gene Alias: | CENTA1|GCS1L|p42IP4 |
| Gene Description: | ArfGAP with dual PH domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
