Difference between revisions of "TSS:Hg 120523.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |SHD1= | ||
| + | |all_trans=HGNC:23536 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=6678 | ||
| + | |end=65047902 | ||
| + | |end_of_center_position=65047888 | ||
|entrez_id=29901 | |entrez_id=29901 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=HSU79266 | + | |gene_alias=HSU79266{{!}}SHD1 |
|gene_description=SAC3 domain containing 1 | |gene_description=SAC3 domain containing 1 | ||
| − | |gene_name= | + | |gene_id=10004 |
| + | |gene_name=N-acetylated alpha-linked acidic dipeptidase like 1 | ||
| + | |gene_source=HGNC:23536 | ||
| + | |gene_symbol=NAALADL1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23536 | ||
|nearest_ensembl=ENSG00000168061 | |nearest_ensembl=ENSG00000168061 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001367486 |
|nearest_refseq=NM_013299 | |nearest_refseq=NM_013299 | ||
|nearest_unigene=Hs.23642 | |nearest_unigene=Hs.23642 | ||
| + | |num_trans=10004 | ||
| + | |species=human | ||
| + | |start=65047873 | ||
| + | |start_of_center_position=65047887 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000532802.5 ENST00000531174.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_120523.1 | |tss_id=hg_120523.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=E9PKW7 | ||
}} | }} | ||
Latest revision as of 00:59, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 65047887 |
|---|---|
| End of the center position in the TSS region: | 65047888 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000532802.5 ENST00000531174.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10004 |
| All_trans: | HGNC:23536 |
TATA-Box annotation
| Distance to TSS: | 6678 |
|---|---|
| Nearest PromoterID: | NM_001367486 |
| Entrez ID: | 29901 |
| Nearest Unigene: | Hs.23642 |
| Nearest Refseq: | NM_013299 |
| Nearest Ensembl: | ENSG00000168061 |
| Gene Name: | N-acetylated alpha-linked acidic dipeptidase like 1 |
| Gene Alias: | HSU79266|SHD1 |
| Gene Description: | SAC3 domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
